PDB entry 6woz

View 6woz on RCSB PDB site
Description: Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 251249
Class: cell invasion
Keywords: invasion, plasmodium vivax, malaria, antibody complex, CELL INVASION
Deposited on 2020-04-26, released 2021-01-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: reticulocyte binding protein 2b
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 251249 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6wozb_
  • Chain 'C':
    Compound: 251249 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6wozc1, d6wozc2
  • Chain 'D':
    Compound: reticulocyte binding protein 2b
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: 251249 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6woze_
  • Chain 'F':
    Compound: 251249 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6wozf1, d6wozf2
  • Chain 'G':
    Compound: reticulocyte binding protein 2b
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: 251249 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6wozh_
  • Chain 'I':
    Compound: 251249 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6wozi1, d6wozi2
  • Chain 'J':
    Compound: reticulocyte binding protein 2b
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: 251249 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6wozk_
  • Chain 'L':
    Compound: 251249 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WOZ
    Domains in SCOPe 2.08: d6wozl1, d6wozl2

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6wozB (B:)
tgvhsevqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgys
sevfytdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdl
wgrgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsg
vhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtc
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozB (B:)
evqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgyssevfy
tdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdlwgrgt
lvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfp
avlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6wozC (C:)
tgvhseivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnra
tgiparfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozC (C:)
eivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnratgipa
rfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6wozE (E:)
tgvhsevqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgys
sevfytdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdl
wgrgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsg
vhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtc
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozE (E:)
evqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgyssevfy
tdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdlwgrgt
lvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfp
avlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6wozF (F:)
tgvhseivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnra
tgiparfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozF (F:)
eivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnratgipa
rfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6wozH (H:)
tgvhsevqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgys
sevfytdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdl
wgrgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsg
vhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtc
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozH (H:)
evqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgyssevfy
tdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdlwgrgt
lvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfp
avlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >6wozI (I:)
tgvhseivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnra
tgiparfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozI (I:)
eivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnratgipa
rfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >6wozK (K:)
tgvhsevqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgys
sevfytdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdl
wgrgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsg
vhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtc
p

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozK (K:)
evqlvesggglvkpggslrlsceasgflfssysmnwvrqapgkglewvssitgyssevfy
tdsvkgrftvsrdnsknslylqmdslraedtavyycaraltifgvvitdywffdlwgrgt
lvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfp
avlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6wozL (L:)
tgvhseivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnra
tgiparfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6wozL (L:)
eivltqspatlslspgdratlscrasqsvttflawyqqkpgqaprlliydvsnratgipa
rfsgsgsgtdftltisslepedfavyycqqrsnwgltfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge