PDB entry 6woc

View 6woc on RCSB PDB site
Description: Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with 5-diphosphoinositol pentakisphosphate and Mg, presoaked with 5-IP7, Mg and Fluoride, soaking 1min in the absence of Fluoride.
Class: hydrolase
Keywords: phosphatase, nudix, catalysis mechanism, Substrate Specificity, inositol, inositol pyrophosphate, HYDROLASE
Deposited on 2020-04-24, released 2021-03-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: N/A
AEROSPACI score: 0.65 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Diphosphoinositol polyphosphate phosphohydrolase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: NUDT3, DIPP, DIPP1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6woca_
  • Heterogens: CL, I7P, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6wocA (A:)
    hhhhhhssgvdlgtenlyfqsmmklksnqtrtydgdgykkraaclcfrseseeevllvss
    srhpdrwivpgggmepeeepsvaavrevceeagvkgtlgrlvgifenqerkhrtyvyvli
    vtevledwedsvnigrkrewfkiedaikvlqyhkpvqasyfetlrqgys
    

    Sequence, based on observed residues (ATOM records): (download)
    >6wocA (A:)
    trtydgdgykkraaclcfrseseeevllvsssrhpdrwivpgggmepeeepsvaavrevc
    eeagvkgtlgrlvgifenqerkhrtyvyvlivtevledwedsvnigrkrewfkiedaikv
    lqyhkpvqasyfet