PDB entry 6wno

View 6wno on RCSB PDB site
Description: plasmodium vivax reticulocyte binding protein 2b (pvrbp2b) bound to human monoclonal antibody 243244
Deposited on 2020-04-23, released 2021-01-27
The last revision was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: XRAY
Resolution: 3.35 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Plasmodium vivax reticulocyte binding protein 2b
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5K736 (5-End)
      • expression tag (4)
  • Chain 'B':
    Compound: 243244 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WNO
  • Chain 'C':
    Compound: 243244 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WNO
  • Chain 'D':
    Compound: Plasmodium vivax reticulocyte binding protein 2b
    Species: Plasmodium vivax (strain Salvador I) [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: 243244 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WNO
  • Chain 'F':
    Compound: 243244 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WNO

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6wnoA (A:)
    gamgstnttdnidyfdisdesnyylisqlrphfsniyffdefkryasyhteikryedihk
    tkvnsllneasraigicnrakntvkglinilenpqkfktqresydvklrqyeekkeafrg
    cllnknrknldqikkinneirdlleklkcsqdcqtnvyfdmikiylvdfkkmpyenydtf
    ikqyknsylsgvdmirkiekqidnpvtinaikftqkemgyiidrfeyhlqkvkhsidqvt
    alsdgvkpkqvtknrlkeyyfnignyysifkfgkdslnmlnkalihkekivhnllgelfg
    hleeris
    

    Sequence, based on observed residues (ATOM records):
    >6wnoA (A:)
    stnttdnidyfdisdesnyylisqlrphfsniyffdefkryasyhteikryedihktkvn
    sllneasraigicnrakntvkglinilenpqkfktqresydvklrqyeekkeafrgclln
    knrknldqikkinneirdlleksqdcqtnvyfdmikiylvdfkkmpyenydtfikqykns
    ylsgvdmirkiekqidnpvtinaikftqkemgyiidrfeyhlqkvkhsidqvtalsdgpk
    qvtknrlkeyyfnignyysifkfgkdslnmlnkalihkekivhnllgelf
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6wnoB (B:)
    tgvhsqvqlvesgggvvqsgkslrvscaasgftfssygmhwvrqapgkglewvafisydg
    dnkysadsvkgrltisrdnskntlylqmnslrpedtavyycakesnygenafdiwgqgtm
    vtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpa
    vlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtcp
    

    Sequence, based on observed residues (ATOM records):
    >6wnoB (B:)
    vqlvesgggvvqsgkslrvscaasgftfssygmhwvrqapgkglewvafisydgdnkysa
    dsvkgrltisrdnskntlylqmnslrpedtavyycakesnygenafdiwgqgtmvtvssa
    stkgpsvfplapssktaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysls
    svvtvpssslgtqtyicnvnhkpsntkvdkkvep
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6wnoC (C:)
    tgswaqsaltqprsvsgspgqsvtisctgtssdvgfynfvswyqhhpgkapkliiydvse
    rpsgvpdrfsgsksgntaslsisglqpedeadyyccsyagtytfvfgsgtkvtvlgqpka
    nptvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnk
    yaassylsltpeqwkshrsyscqvthegstvektvaptecs
    

    Sequence, based on observed residues (ATOM records):
    >6wnoC (C:)
    altqprsvsgspgqsvtisctgtssdvgfynfvswyqhhpgkapkliiydvserpsgvpd
    rfsgsksgntaslsisglqpedeadyyccsyagtytfvfgsgtkvtvlgqpkanptvtlf
    ppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassyl
    sltpeqwkshrsyscqvthegstvektvap
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6wnoD (D:)
    gamgstnttdnidyfdisdesnyylisqlrphfsniyffdefkryasyhteikryedihk
    tkvnsllneasraigicnrakntvkglinilenpqkfktqresydvklrqyeekkeafrg
    cllnknrknldqikkinneirdlleklkcsqdcqtnvyfdmikiylvdfkkmpyenydtf
    ikqyknsylsgvdmirkiekqidnpvtinaikftqkemgyiidrfeyhlqkvkhsidqvt
    alsdgvkpkqvtknrlkeyyfnignyysifkfgkdslnmlnkalihkekivhnllgelfg
    hleeris
    

    Sequence, based on observed residues (ATOM records):
    >6wnoD (D:)
    tnttdnidyfdisdesnyylisqlrphfsniyffdefkryasyhteikryedihktkvns
    llneasraigicnrakntvkglinilenpqkfktqresydvklrqyeekkeafrgcllnk
    nrknldqikkinneirdlleklkcsqdcqtnvyfdmikiylvdfkkmpyenydtfikqyk
    nsylsgvdmirkiekqidnpvtinaikftqkemgyiidrfeyhlqkvkhsidqvtalsdg
    vkpkqvtknrlkeyyfnignyysifkfgkdslnmlnkalihkekivhnllgelfgh
    

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6wnoE (E:)
    tgvhsqvqlvesgggvvqsgkslrvscaasgftfssygmhwvrqapgkglewvafisydg
    dnkysadsvkgrltisrdnskntlylqmnslrpedtavyycakesnygenafdiwgqgtm
    vtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpa
    vlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtcp
    

    Sequence, based on observed residues (ATOM records):
    >6wnoE (E:)
    qvqlvesgggvvqsgkslrvscaasgftfssygmhwvrqapgkglewvafisydgdnkys
    adsvkgrltisrdnskntlylqmnslrpedtavyycakesnygenafdiwgqgtmvtvss
    astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
    glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6wnoF (F:)
    tgswaqsaltqprsvsgspgqsvtisctgtssdvgfynfvswyqhhpgkapkliiydvse
    rpsgvpdrfsgsksgntaslsisglqpedeadyyccsyagtytfvfgsgtkvtvlgqpka
    nptvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnk
    yaassylsltpeqwkshrsyscqvthegstvektvaptecs
    

    Sequence, based on observed residues (ATOM records):
    >6wnoF (F:)
    saltqprsvsgspgqsvtisctgtssdvgfynfvswyqhhpgkapkliiydvserpsgvp
    drfsgsksgntaslsisglqpedeadyyccsyagtytfvfgsgtkvtvlgqpkanptvtl
    fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
    lsltpeqwkshrsyscqvthegstvektvapt