PDB entry 6wn1

View 6wn1 on RCSB PDB site
Description: Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 241242
Class: cell invasion
Keywords: invasion, plasmodium vivax, malaria, antibody complex, CELL INVASION
Deposited on 2020-04-22, released 2021-01-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-04-07, with a file datestamp of 2021-04-02.
Experiment type: XRAY
Resolution: 3.15 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: reticulocyte binding protein 2b
    Species: Plasmodium vivax Sal-1 [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 241242 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WN1
    Domains in SCOPe 2.08: d6wn1b_
  • Chain 'C':
    Compound: 241242 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WN1
    Domains in SCOPe 2.08: d6wn1c1, d6wn1c2
  • Chain 'D':
    Compound: reticulocyte binding protein 2b
    Species: Plasmodium vivax Sal-1 [TaxId:126793]
    Gene: PVX_094255
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: 241242 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WN1
    Domains in SCOPe 2.08: d6wn1e_
  • Chain 'F':
    Compound: 241242 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WN1
    Domains in SCOPe 2.08: d6wn1f1

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6wn1B (B:)
tgvhsevqllesggglvqpggslrlscavsgftfrnyalswvrqapgkgldwvstisasg
gatyyadsvkghftisrdnsknilyldmkslraedtaiyycardggsytpyffldswgqg
alvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtcp

    Sequence, based on observed residues (ATOM records): (download) 
    >6wn1B (B:)
evqllesggglvqpggslrlscavsgftfrnyalswvrqapgkgldwvstisasggatyy
adsvkghftisrdnsknilyldmkslraedtaiyycardggsytpyffldswgqgalvtv
ssastkgpsvfplapsskgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6wn1C (C:)
tgsvtsyeltqpasvsvapgqtaqitcggnsigrksihwyqhkpgqapvlvisydsdrps
giperfsgsnsgntatltiskveagdeadfycqvrdsdndhvvfgggtkltvlgqpkaap
svtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkya
assylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >6wn1C (C:)
yeltqpasvsvapgqtaqitcggnsigrksihwyqhkpgqapvlvisydsdrpsgiperf
sgsnsgntatltiskveagdeadfycqvrdsdndhvvfgggtkltvlgqpkaapsvtlfp
psseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassyls
ltpeqwkshrsyscqvthegstvektvapte

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6wn1E (E:)
tgvhsevqllesggglvqpggslrlscavsgftfrnyalswvrqapgkgldwvstisasg
gatyyadsvkghftisrdnsknilyldmkslraedtaiyycardggsytpyffldswgqg
alvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkthtcp

    Sequence, based on observed residues (ATOM records): (download) 
    >6wn1E (E:)
vqllesggglvqpggslrlscavsgftfrnyalswvrqapgkgldwvstisasggatyya
dsvkghftisrdnsknilyldmkslraedtaiyycardggsytpyffldswgqgalvtv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6wn1F (F:)
tgsvtsyeltqpasvsvapgqtaqitcggnsigrksihwyqhkpgqapvlvisydsdrps
giperfsgsnsgntatltiskveagdeadfycqvrdsdndhvvfgggtkltvlgqpkaap
svtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkya
assylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >6wn1F (F:)
yeltqpasvsvapgqtaqitcggnsigrksihwyqhkpgqapvlvisydsdrpsgiperf
sgsnsgntatltiskveagdeadfycqvrdsdndhvvfgggtkltvlgqpk