PDB entry 6wmq

View 6wmq on RCSB PDB site
Description: crystal structure of human rev-erbbeta ligand binding domain co-bound to heme and ncor id1 peptide
Deposited on 2020-04-21, released 2021-02-17
The last revision was dated 2021-02-24, with a file datestamp of 2021-02-19.
Experiment type: XRAY
Resolution: 2.55 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nuclear receptor Rev-ErbA beta variant 1
    Species: Homo sapiens [TaxId:9606]
    Gene: NR1D2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Nuclear receptor Rev-ErbA beta variant 1
    Species: Homo sapiens [TaxId:9606]
    Gene: NR1D2
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Nuclear receptor corepressor 1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Nuclear receptor corepressor 1
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HEM, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6wmqA (A:)
hlvcpmskspyvdphksgheiweefsmsftpavkevvefakripgfrdlsqhdqvnllka
gtfevlmvrfaslfdakertvtflsgkkysvddlhsmgagdllnsmfefseklnalqlsd
eemslftavvlvsadrsgienvnsvealqetliralrtlimknhpneasiftklllklpd
lrslnnmhseellafkvhp

    Sequence, based on observed residues (ATOM records):
    >6wmqA (A:)
hlvcpmskspyvdphksgheiweefsmsftpavkevvefakripgfrdlsqhdqvnllka
gtfevlmvrfaslfdakertvtflsgkkysvddlhsmgagdllnsmfefseklnalqlsd
eemslftavvlvsadrsgienvnsvealqetliralrtlimknhpneasiftklllklpd
lrslnnmhseellafkv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6wmqB (B:)
hlvcpmskspyvdphksgheiweefsmsftpavkevvefakripgfrdlsqhdqvnllka
gtfevlmvrfaslfdakertvtflsgkkysvddlhsmgagdllnsmfefseklnalqlsd
eemslftavvlvsadrsgienvnsvealqetliralrtlimknhpneasiftklllklpd
lrslnnmhseellafkvhp

    Sequence, based on observed residues (ATOM records):
    >6wmqB (B:)
hlvcpmskspyvdphksgheiweefsmsftpavkevvefakripgfrdlsqhdqvnllka
gtfevlmvrfaslfdakertvtflsgkkysvddlhsmgagdllnsmfefseklnalqlsd
eemslftavvlvsadrsgienvnsvealqetliralrtlimknhpneasiftklllklpd
lrslnnmhseellafkv

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6wmqE (E:)
rthrlitladhicqiitqdfarn

    Sequence, based on observed residues (ATOM records):
    >6wmqE (E:)
itladhicqiitqdf

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6wmqF (F:)
rthrlitladhicqiitqdfarn

    Sequence, based on observed residues (ATOM records):
    >6wmqF (F:)
tladhicqiitqdf