PDB entry 6wmi

View 6wmi on RCSB PDB site
Description: znf410 zinc fingers 1-5 with 17 mer blunt dna oligonucleotide
Deposited on 2020-04-21, released 2020-12-09
The last revision was dated 2021-06-23, with a file datestamp of 2021-06-18.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Zinc finger protein 410
    Species: Homo sapiens [TaxId:9606]
    Gene: ZNF410, APA1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (5'-d(*cp*ap*cp*ap*tp*cp*cp*cp*ap*tp*ap*ap*tp*ap*ap*tp*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'C':
    Compound: DNA (5'-d(*cp*ap*tp*tp*ap*tp*tp*ap*tp*gp*gp*gp*ap*tp*gp*tp*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'D':
    Compound: Zinc finger protein 410
    Species: Homo sapiens [TaxId:9606]
    Gene: ZNF410, APA1
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA (5'-d(*cp*ap*cp*ap*tp*cp*cp*cp*ap*tp*ap*ap*tp*ap*ap*tp*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'F':
    Compound: DNA (5'-d(*cp*ap*tp*tp*ap*tp*tp*ap*tp*gp*gp*gp*ap*tp*gp*tp*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: EDO, ZN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6wmiA (A:)
gplgskklkctvegcdrtfvwpahfkyhlkthrndrsficpaegcgksfyvlqrlkvhmr
thngekpfmchesgcgkqfttagnlknhrrihtgekpflceaqgcgrsfaeysslrkhlv
vhsgekphqcqvcgktfsqsgsrnvhmrkhhlqlg

    Sequence, based on observed residues (ATOM records):
    >6wmiA (A:)
kklkctvegcdrtfvwpahfkyhlkthrndrsficpaegcgksfyvlqrlkvhmrthnge
kpfmchesgcgkqfttagnlknhrrihtgekpflceaqgcgrsfaeysslrkhlvvhsge
kphqcqvcgktfsqsgsrnvhmrkhh

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6wmiD (D:)
gplgskklkctvegcdrtfvwpahfkyhlkthrndrsficpaegcgksfyvlqrlkvhmr
thngekpfmchesgcgkqfttagnlknhrrihtgekpflceaqgcgrsfaeysslrkhlv
vhsgekphqcqvcgktfsqsgsrnvhmrkhhlqlg

    Sequence, based on observed residues (ATOM records):
    >6wmiD (D:)
kklkctvegcdrtfvwpahfkyhlkthrndrsficpaegcgksfyvlqrlkvhmrthnge
kpfmchesgcgkqfttagnlknhrrihtgekpflceaqgcgrsfaeysslrkhlvvhsge
kphqcqvcgktfsqsgsrnvhmrkhh

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.