PDB entry 6wi1

View 6wi1 on RCSB PDB site
Description: glun1b-glun2b nmda receptor in active conformation stabilized by inter-glun1b-glun2b subunit cross-linking
Deposited on 2020-04-08, released 2020-07-15
The last revision was dated 2020-08-05, with a file datestamp of 2020-07-31.
Experiment type: EM
Resolution: 3.62 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ionotropic glutamate receptor , NMDA receptor GluN1b
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WI1
  • Chain 'B':
    Compound: Ionotropic glutamate receptor , NMDA receptor GluN2B
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WI1
  • Chain 'C':
    Compound: Ionotropic glutamate receptor , NMDA receptor GluN1b
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WI1
  • Chain 'D':
    Compound: Ionotropic glutamate receptor , NMDA receptor GluN2B
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WI1
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6wi1A (A:)
mstmhlltfallfscsfaraasdpkivnigavlstrkheqmfreavnqankrhgswkiql
qatsvthkpnaiqmalsvcedlissqvyailvshpptpndhftptpvsytagfyripvlg
lttrmsiysdksihlsflrtvppyshqssvwfemmrvynwnhiillvsddhegraaqkrl
etlleereskskkrnyenldqlsydnkrgpkaekvlqfdpgtknvtallmearelearvi
ilsaseddaatvyraaamldmtgsgyvwlvgereisgnalryapdgiiglqlingknesa
hisdavgvvaqavhellekenitdpprgcvgntniwktgplfkrvlmsskyadgvtgrve
fnedgdrkfaqysimnlqnrklvqvgiyngthvipndrkiiwpggetekprgyqmstrlk
ivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpndtspgsprhtvpqccygfc
idlliklartmqftyevhlvadgkfgtqervqnsnkkewngmmgellsgqadmivaplti
nneraqyiefskpfkyqgltilvkkeiprstldsfmqpfqstlwllvglsvhvvavmlyl
ldrfspfgrfkvnseeeeedaltlssamwfswgvllnsgigegaprsfsarilgmvwagf
amiivasytanlaaflvldrpeeritgindprlrnpsdkfiyatvkqssvdiyfrrqvcl
stmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffrsgfg
igmrkdspwkqqvslsilkshengfmedldktwvryqecdsrsnapatltfenmagvfml
vaggivagiflifieiaykrhkdangaq

    Sequence, based on observed residues (ATOM records):
    >6wi1A (A:)
kivnigavlstrkheqmfreavnqankrhgswkiqlqatsvthkpnaiqmalsvcedlis
sqvyailvshpptpndhftptpvsytagfyripvlglttrmsiysdksihlsflrtvppy
shqssvwfemmrvynwnhiillvsddhegraaqkrletlleeresknkrgpkaekvlqfd
pgtknvtallmearelearviilsaseddaatvyraaamldmtgsgyvwlvgereisgna
lryapdgiiglqlingknesahisdavgvvaqavhellekenitdpprgcvgntniwktg
plfkrvlmsskyadgvtgrvefnedgdrkfaqysimnlqnrklvqvgiyngthvipndrk
iiwpggetekprgyqmstrlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictg
pndtspgsprhtvpqccygfcidlliklartmqftyevhlvadgkfgtqervqnsnkkew
ngmmgellsgqadmivapltinneraqyiefskpfkyqgltilvkkeiprstldsfmqpf
qstlwllvglsvhvvavmlylldrfstlssamwfswgvllnsgigegaprsfsarilgmv
wagfamiivasytanlaaflvldrpeeritgindprlrnpsdkfiyatvkqssvdiyfrr
qvclstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffr
sgfgigmrkdspwkqqvslsilkshengfmedldktwvryqecdsrsnapatltfenmag
vfmlvaggivagiflifieiaykrhk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6wi1B (B:)
mgtmrlfllavlflfsfaratgwshpqfekgggsgggsggsawshpqfekgalvprgrsq
ksppsigiavilvgtsdevaikdahekddfhhlsvvprvelvamnetdpksiitricdlm
sdrkiqgvvfaddtdqeaiaqildfisaqtltpilgihggssmimadkdessmffqfgps
ieqqasvmlnimeeydwyifsivttyfpgyqdfvnkirstiensfvgweleevllldmsl
ddgdskiqnqlkklqspiillyctkeeatyifevansvgltgygytwivpslvagdtdtv
psefptglisvsydewdyglparvrdgiaiittaasdmlsehsfipepksscynthekri
yqsnmlnrylinvtfegrnlsfsedgyqmhpklviillnkerkwervgkwkdkslqmkyy
vwprmcpeteeqeddhlsivtleeapfvivesvdplsgtcmrntvpcqkriisenktdee
pgyikkcckgfcidilkkisksvkftydlylvtngkhgkkingtwngmigevvmkrayma
vgsltineersevvdfsvpfietgisvmvsrsngtvspsaflepfsadvwvmmfvmlliv
savavfvfeyfspvgynrcladgrepggpsftigkaiwllwglvfnnsvpvqnpkgttsk
imvsvwaffaviflasytanlaafmiqeeyvdqvsglsdkkfqrpndfsppfrfgtvpng
sternirnnyaemhaymgkfnqrgvddallslktgkldafiydaavlnymagrdegcklv
tigsgkvfastgygiaiqkdsgwkrqvdlailqlfgdgemeeleacwltgichneknevm
ssqldidnmagvfymlgaamalslitficehlfywqfrhsfmg

    Sequence, based on observed residues (ATOM records):
    >6wi1B (B:)
sigiavilvgtsdevaikdahekddfhhlsvvprvelvamnetdpksiitricdlmsdrk
iqgvvfaddtdqeaiaqildfisaqtltpilgihggssmimadkdessmffqfgpsieqq
asvmlnimeeydwyifsivttyfpgyqdfvnkirstiensfvgweleevllldmslddgd
skiqnqlkklqspiillyctkeeatyifevansvgltgygytwivpslvagdtdtvpsef
ptglisvsydewdyglparvrdgiaiittaasdmlsehsfipepksscynthekriyqsn
mlnrylinvtfegrnlsfsedgyqmhpklviillnkerkwervgkwkdkslqmkyyvwpr
mcpddhlsivtleeapfvivesvdplsgtcmrntvpcqkriisenktdeepgyikkcckg
fcidilkkisksvkftydlylvtngkhgkkingtwngmigevvmkraymavgsltineer
sevvdfsvpfietgisvmvsrsngtvspsaflepfsadvwvmmfvmllivsavavfvfey
ftigkaiwllwglvfnnsvpvqnpkgttskimvsvwaffaviflasytanlaafmiqeey
vdqvsglsdkkfqrpndfsppfrfgtvpngsternirnnyaemhaymgkfnqrgvddall
slktgkldafiydaavlnymagrdegcklvtigsgkvfastgygiaiqkdsgwkrqvdla
ilqlfgdgemeeleacwltgichneknevmssqldidnmagvfymlgaamalslitfice
hlfyw

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6wi1C (C:)
mstmhlltfallfscsfaraasdpkivnigavlstrkheqmfreavnqankrhgswkiql
qatsvthkpnaiqmalsvcedlissqvyailvshpptpndhftptpvsytagfyripvlg
lttrmsiysdksihlsflrtvppyshqssvwfemmrvynwnhiillvsddhegraaqkrl
etlleereskskkrnyenldqlsydnkrgpkaekvlqfdpgtknvtallmearelearvi
ilsaseddaatvyraaamldmtgsgyvwlvgereisgnalryapdgiiglqlingknesa
hisdavgvvaqavhellekenitdpprgcvgntniwktgplfkrvlmsskyadgvtgrve
fnedgdrkfaqysimnlqnrklvqvgiyngthvipndrkiiwpggetekprgyqmstrlk
ivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpndtspgsprhtvpqccygfc
idlliklartmqftyevhlvadgkfgtqervqnsnkkewngmmgellsgqadmivaplti
nneraqyiefskpfkyqgltilvkkeiprstldsfmqpfqstlwllvglsvhvvavmlyl
ldrfspfgrfkvnseeeeedaltlssamwfswgvllnsgigegaprsfsarilgmvwagf
amiivasytanlaaflvldrpeeritgindprlrnpsdkfiyatvkqssvdiyfrrqvcl
stmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffrsgfg
igmrkdspwkqqvslsilkshengfmedldktwvryqecdsrsnapatltfenmagvfml
vaggivagiflifieiaykrhkdangaq

    Sequence, based on observed residues (ATOM records):
    >6wi1C (C:)
kivnigavlstrkheqmfreavnqankrhgswkiqlqatsvthkpnaiqmalsvcedlis
sqvyailvshpptpndhftptpvsytagfyripvlglttrmsiysdksihlsflrtvppy
shqssvwfemmrvynwnhiillvsddhegraaqkrletlleeresknkrgpkaekvlqfd
pgtknvtallmearelearviilsaseddaatvyraaamldmtgsgyvwlvgereisgna
lryapdgiiglqlingknesahisdavgvvaqavhellekenitdpprgcvgntniwktg
plfkrvlmsskyadgvtgrvefnedgdrkfaqysimnlqnrklvqvgiyngthvipndrk
iiwpggetekprgyqmstrlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictg
pndtspgsprhtvpqccygfcidlliklartmqftyevhlvadgkfgtqervqnsnkkew
ngmmgellsgqadmivapltinneraqyiefskpfkyqgltilvkkeiprstldsfmqpf
qstlwllvglsvhvvavmlylldrfstlssamwfswgvllnsgigegaprsfsarilgmv
wagfamiivasytanlaaflvldrpeeritgindprlrnpsdkfiyatvkqssvdiyfrr
qvclstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffr
sgfgigmrkdspwkqqvslsilkshengfmedldktwvryqecdsrsnapatltfenmag
vfmlvaggivagiflifieiaykrhk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6wi1D (D:)
mgtmrlfllavlflfsfaratgwshpqfekgggsgggsggsawshpqfekgalvprgrsq
ksppsigiavilvgtsdevaikdahekddfhhlsvvprvelvamnetdpksiitricdlm
sdrkiqgvvfaddtdqeaiaqildfisaqtltpilgihggssmimadkdessmffqfgps
ieqqasvmlnimeeydwyifsivttyfpgyqdfvnkirstiensfvgweleevllldmsl
ddgdskiqnqlkklqspiillyctkeeatyifevansvgltgygytwivpslvagdtdtv
psefptglisvsydewdyglparvrdgiaiittaasdmlsehsfipepksscynthekri
yqsnmlnrylinvtfegrnlsfsedgyqmhpklviillnkerkwervgkwkdkslqmkyy
vwprmcpeteeqeddhlsivtleeapfvivesvdplsgtcmrntvpcqkriisenktdee
pgyikkcckgfcidilkkisksvkftydlylvtngkhgkkingtwngmigevvmkrayma
vgsltineersevvdfsvpfietgisvmvsrsngtvspsaflepfsadvwvmmfvmlliv
savavfvfeyfspvgynrcladgrepggpsftigkaiwllwglvfnnsvpvqnpkgttsk
imvsvwaffaviflasytanlaafmiqeeyvdqvsglsdkkfqrpndfsppfrfgtvpng
sternirnnyaemhaymgkfnqrgvddallslktgkldafiydaavlnymagrdegcklv
tigsgkvfastgygiaiqkdsgwkrqvdlailqlfgdgemeeleacwltgichneknevm
ssqldidnmagvfymlgaamalslitficehlfywqfrhsfmg

    Sequence, based on observed residues (ATOM records):
    >6wi1D (D:)
sigiavilvgtsdevaikdahekddfhhlsvvprvelvamnetdpksiitricdlmsdrk
iqgvvfaddtdqeaiaqildfisaqtltpilgihggssmimadkdessmffqfgpsieqq
asvmlnimeeydwyifsivttyfpgyqdfvnkirstiensfvgweleevllldmslddgd
skiqnqlkklqspiillyctkeeatyifevansvgltgygytwivpslvagdtdtvpsef
ptglisvsydewdyglparvrdgiaiittaasdmlsehsfipepksscynthekriyqsn
mlnrylinvtfegrnlsfsedgyqmhpklviillnkerkwervgkwkdkslqmkyyvwpr
mcpddhlsivtleeapfvivesvdplsgtcmrntvpcqkriisenktdeepgyikkcckg
fcidilkkisksvkftydlylvtngkhgkkingtwngmigevvmkraymavgsltineer
sevvdfsvpfietgisvmvsrsngtvspsaflepfsadvwvmmfvmllivsavavfvfey
ftigkaiwllwglvfnnsvpvqnpkgttskimvsvwaffaviflasytanlaafmiqeey
vdqvsglsdkkfqrpndfsppfrfgtvpngsternirnnyaemhaymgkfnqrgvddall
slktgkldafiydaavlnymagrdegcklvtigsgkvfastgygiaiqkdsgwkrqvdla
ilqlfgdgemeeleacwltgichneknevmssqldidnmagvfymlgaamalslitfice
hlfyw