PDB entry 6wgm

View 6wgm on RCSB PDB site
Description: crystal structure of a marine metagenome trap solute binding protein specific for pyroglutamate (sorcerer ii global ocean sampling expedition, unidentified microbe, scf7180008839099) in complex with co-purified pyroglutamate
Deposited on 2020-04-05, released 2020-04-29
The last revision was dated 2020-05-13, with a file datestamp of 2020-05-08.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TRAP-type C4-dicarboxylate transport system, periplasmic component
    Species: Uncultured bacterium [TaxId:77133]
    Gene: HIMB100_00003270
    Database cross-references and differences (RAF-indexed):
    • Uniprot G5ZWD6 (23-322)
      • expression tag (19-22)
      • conflict (45)
      • conflict (113)
      • conflict (217)
      • conflict (243)
      • conflict (261)
      • conflict (269)
      • conflict (288)
      • conflict (295)
  • Heterogens: PCA, EDO, CL, FMT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6wgmA (A:)
mhhhhhhssgvdlgtenlyfqsmkwdmpmayaatnfhsehgvifadkvkaytggkleitt
hpggslfkggeikravqtgqapigerfmsahaneapllgwdnlpflatsyedndklwaaa
kdkvnaqladlnlvalytcpwpgqgfyfkkevtssadtqgikfrsynsatatfakelgml
pvqveaaelsqalatgvaeafissgstgydrkvwehlshyykvnawlprnyviinkgiye
glsddirsalhkaadetgaacaaksaelanwyfeqleangmkvedagpaflkelksigak
mqadwlasvgadgqaivdaykkm

    Sequence, based on observed residues (ATOM records):
    >6wgmA (A:)
fqsmkwdmpmayaatnfhsehgvifadkvkaytggkleitthpggslfkggeikravqtg
qapigerfmsahaneapllgwdnlpflatsyedndklwaaakdkvnaqladlnlvalytc
pwpgqgfyfkkevtssadtqgikfrsynsatatfakelgmlpvqveaaelsqalatgvae
afissgstgydrkvwehlshyykvnawlprnyviinkgiyeglsddirsalhkaadetga
acaaksaelanwyfeqleangmkvedagpaflkelksigakmqadwlasvgadgqaivda
ykkm