PDB entry 6wgf

View 6wgf on RCSB PDB site
Description: atomic model of mutant mcm2-7 hexamer with mcm6 whd truncation
Deposited on 2020-04-05, released 2020-07-15
The last revision was dated 2020-08-12, with a file datestamp of 2020-08-07.
Experiment type: EM
Resolution: 7.7 Å
R-factor: N/A
AEROSPACI score: -0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '2':
    Compound: DNA replication licensing factor mcm2
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MCM2, YBL023C, YBL0438
    Database cross-references and differences (RAF-indexed):
  • Chain '3':
    Compound: DNA replication licensing factor MCM3
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MCM3, YEL032W, SYGP-ORF23
    Database cross-references and differences (RAF-indexed):
  • Chain '4':
    Compound: DNA replication licensing factor MCM4
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MCM4, CDC54, HCD21, YPR019W, YP9531.13
    Database cross-references and differences (RAF-indexed):
  • Chain '5':
    Compound: Minichromosome maintenance protein 5
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MCM5, CDC46, YLR274W, L9328.1
    Database cross-references and differences (RAF-indexed):
  • Chain '6':
    Compound: DNA replication licensing factor MCM6
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MCM6, YGL201C
    Database cross-references and differences (RAF-indexed):
  • Chain '7':
    Compound: DNA replication licensing factor MCM7
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: MCM7, CDC47, YBR202W, YBR1441
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '2':
    Sequence, based on SEQRES records:
    >6wgf2 (2:)
    msdnrrrrreeddsdsenelppsspqqhfrggmnpvsspigspdminpegddnevddvpd
    ideveeqmnevdlmddnmyedyaadhnrdrydpdqvddreqqelslserrridaqlnerd
    rllrnvayiddedeeqegaaqldemglpvqrrrrrrqyedlensdddllsdmdidplree
    ltleslsnvkansysewitqpnvsrtiarelksflleytdetgrsvygarirtlgemnse
    slevnyrhlaeskailalflakcpeemlkifdlvameatelhypdyarihseihvrisdf
    ptiyslrelresnlsslvrvtgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeir
    isfctnckskgpfrvngektvyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskp
    geevevtgiyknnydgnlnakngfpvfatiieansikrregntanegeegldvfswteee
    erefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngkhsirgdinvl
    llgdpgtaksqilkyvektahravfatgqgasavgltasvrkdpitkewtleggalvlad
    kgvclidefdkmndqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynst
    lplaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrshpendedregeelk
    nngesaieqgedeineqlnarqrrlqrqrkkeeeispipqellmkyihyartkiypklhq
    mdmdkvsrvyadlrresistgsfpitvrhlesilriaesfakmrlsefvssydldraikv
    vvdsfvdaqkvsvrrqlrrsfaiytlgh
    

    Sequence, based on observed residues (ATOM records):
    >6wgf2 (2:)
    pnvsrtiarelksflleytdetgrsvygarirtlgemnseslevnyrhlaeskailalfl
    akcpeemlkifdlvameatelhypdyarihseihvrisdfptiyslrelresnlsslvrv
    tgvvtrrtgvfpqlkyvkfnclkcgsilgpffqdsneeirisfctnckskgpfrvngekt
    vyrnyqrvtlqeapgtvppgrlprhrevilladlvdvskpgeevevtgiykiieansikr
    revfswteeeerefrkisrdrgiidkiissmapsiyghrdiktavacslfggvpknvngk
    hsirgdinvlllgdpgtaksqilkyvektahravfatltasvrkdpitkewtleggaadk
    gvclidefdkmndqdrtsiheameqqsisiskagivttlqarcsiiaaanpnggrynstl
    plaqnvsltepilsrfdilcvvrdlvdeeaderlatfvvdshvrsspipqellmkyihya
    rtkiypkrhlesilriaesfakmrlsef
    

  • Chain '3':
    Sequence, based on SEQRES records:
    >6wgf3 (3:)
    megstgfdgdattffapdavfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanynddq
    ddaderdllgdddgddlekekkaasstslnilphriiislddlrefdrsfwsgilvepay
    fippaekaltdladsmddvphpnasavssrhpwklsfkgsfgahalsprtltaqhlnklv
    svegivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnk
    ltteygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfks
    lgaggmnqsnsntligfktlilgntvyplharstgvaarqmltdfdirninklskkkdif
    dilsqslapsiyghdhikkaillmlmggveknlengshlrgdinilmvgdpstaksqllr
    fvlntaslaiattgrgssgvgltaavttdretgerrleagamvladrgvvcidefdkmtd
    vdrvaihevmeqqtvtiakagihttlnarcsviaaanpvfgqydvnrdphqnialpdsll
    srfdllfvvtddineirdrsisehvlrthrylppgylegepvrerlnlslavgedadinp
    eehsnsgagvenegeddedhvfekfnpllqagaklaknkgnyngteipklvtipflrkyv
    qyakervipqltqeainvivknytdlrnddntkkspitartletlirlatahakvrlskt
    vnkvdakvaanllrfallgedigndideeeseyeealskrspqkspkkrqrvrqpasnsg
    spikstprrstassvnatpssarrilrfqddeqnageddndimsplpadeeaelqrrlql
    glrvsprrrehlhapeegssgpltevgtprlpnvssagqddeqqqsvisfdnvepgtist
    grlslisgiiarlmqteifeeesypvaslferineelpeeekfsaqeylaglkimsdrnn
    lmvaddkvwrv
    

    Sequence, based on observed residues (ATOM records):
    >6wgf3 (3:)
    vfgdrvrrfqefldtftsyrdsvrsiqvynsnnaanyilphriiislddlrefdrsfwsg
    ilvepayfippaekaltdladsmddvphhpwklsfkgsfgahalsprtltaqhlnklvsv
    egivtktslvrpklirsvhyaaktgrfhyrdytdatttlttriptpaiyptedtegnklt
    teygystfidhqritvqempemapagqlprsidvildddlvdktkpgdrvnvvgvfkslt
    lilgntvyplrqmltdfdirninklskkkdifdilsqslapsiyghdhikkaillmlmgg
    veknlengshlrgdinilmvgdpstaksqllrfvlntaslaiattgrgssgvgltaavtt
    dretgerrleagamvladrgvvcidefdkmtdvdrvaihevmeqqtvtiakagihttlna
    rcsviaaanpvfgqydvnrdphqnialpdsllsrfdllfvvtddineirdrsisehvlrv
    tipflrkyvqyakervipqltqeainvivknytdlrddntkkspitartletlirlatah
    akvrlsktvnkvdakvaanllrfall
    

  • Chain '4':
    Sequence, based on SEQRES records:
    >6wgf4 (4:)
    msqqsssptkednnssspvvpnpdsvppqlsspalfysssssqgdiygrnnsqnlsqgeg
    niraaigssplnfpsssqrqnsdvfqsqgrqgrirssasasgrsryhsdlrsdralptss
    sslgrngqnrvhmrrndihtsdlssprrivdfdtrsgvntldtssssappseaseplrii
    wgtnvsiqecttnfrnflmsfkykfrkildereefinnttdeelyyikqlnemrelgtsn
    lnldarnllaykqtedlyhqllnypqevisimdqtikdcmvslivdnnldydldeietkf
    ykvrpynvgsckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmavei
    drgviqeparceridcnepnsmslihnrcsfadkqviklqetpdfvpdgqtphsislcvy
    delvdscragdrievtgtfrsipiransrqrvlkslyktyvdvvhvkkvsdkrldvdtst
    ieqelmqnkvdhneveevrqitdqdlakirevaaredlysllarsiapsiyeledvkkgi
    llqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgssavg
    ltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisiakag
    iittlnarssilasanpigsrynpnlpvtenidlpppllsrfdlvylvldkvdekndrel
    akhltnlyledkpehisqddvlpvefltmyisyakehihpiiteaaktelvrayvgmrkm
    gddsrsdekritattrqlesmirlaeahakmklknvveledvqeavrlirsaikdyatdp
    ktgkidmnlvqtgksviqrklqedlsreimnvlkdqasdsmsfnelikqinehsqdrves
    sdiqealsrlqqedkvivlgegvrrsvrlnnrv
    

    Sequence, based on observed residues (ATOM records):
    >6wgf4 (4:)
    lriiwgtnvsiqecttnfrnflmsfkykfrkilderdeelyyikqlnemrelgtsnlnld
    arnllaykqtedlyhqllnypqevisimdqtikdcmvslivdldeietkfykvrpynvgs
    ckgmrelnpndidklinlkglvlrstpvipdmkvaffkcnvcdhtmaveidrgviqepar
    ceridcnepnsmslihnrcsfadkqviklqephsislcvydelvdscragdrievtgtfr
    sktyvdvvhvkkvshneveevrqitdqdlakirevaaredlysllarsiapsiyeledvk
    kgillqlfggtnktftkggryrgdinillcgdpstsksqilqyvhkitprgvytsgkgss
    avgltayitrdvdtkqlvlesgalvlsdggvccidefdkmsdstrsvlhevmeqqtisia
    kagiittlnarssilasanpigsynpnlpvtenidlpppllsrfdlvylvldkvdekndr
    elakhltnlylefltmyisyakehihpiiteaaktelvrayvgmrktrqlesmirlaeah
    akmklknvveledvqeavrlirsaikrklqedlsreimnvlkdqasdsmsfnelikqine
    hsqdrvessdiqealsrlqqedkvivlgegvrrsvr
    

  • Chain '5':
    Sequence, based on SEQRES records:
    >6wgf5 (5:)
    msfdrpeiysapvlqgespndddnteiiksfknfilefrldsqfiyrdqlrnnilvknys
    ltvnmehligynediykklsdepsdiiplfetaitqvakrisilsraqsannndkdpent
    smdtdslllnslptfqlilnsnanqiplrdldsehvskivrlsgiiistsvlssratyls
    imcrncrhttsitinnfnsitgntvslprsclstiesessmanesnigdestkkncgpdp
    yiiihesskfidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysi
    ynskngagsgrsgggnggsgvairtpyikilgiqsdvetssiwnsvtmfteeeeeeflql
    srnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgmrlrgdinvlllgdpgt
    aksqllkfvekvspiavytsgkgssaagltasvqrdpmtrefyleggamvladggvvcid
    efdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaanpiygryddlkspgdni
    dfqttilsrfdmifivkddhneerdisianhvinihtgnanamqnqqeengseisiekmk
    ryitycrlkcaprlspqaaeklssnfvtirkqllinelesterssipitirqleaiirit
    eslaklelspiaqerhvdeairlfqastmdaasqdpigglnqasgtslseirrfeqelkr
    rlpigwstsyqtlrrefvdthrfsqlaldkalyalekhetiqlrhqgqniyrsgv
    

    Sequence, based on observed residues (ATOM records):
    >6wgf5 (5:)
    teiiksfknfilefrldsqfiyrdqlrnnilvknysltvnmehligynediykklsdeps
    diiplfetaitqvakrisilsraqsanslptfqlilnsnanqiplrdldsehvskivrls
    giiistsvlssratylsimcrncrhttsitinnfntgntvslprscncgpdpyiiihess
    fidqqflklqeipelvpvgemprnltmtcdryltnkvipgtrvtivgiysiyrtpyikil
    giqsdteeeeeeflqlsrnpklyeiltnsiapsifgnedikkaivcllmggskkilpdgm
    rlrgdinvlllgdpgtaksqllkfvekvspiavytsgkgssaagltasvqrdpmtrefyl
    eggamvladggvvcidefdkmrdedrvaiheameqqtisiakagittvlnsrtsvlaaan
    dfqttilsrfdmisiekmkryitycrlkcaprlspqaaeklssnfvtirkqllinelest
    erpitirqleaiiriteslaklelspiaqerhvdeairlfqastmdaasslseirrfeqe
    lkrrlpigwstsyqtlrrefvdthrfsqlaldkalyalekhetiqlrhqgqniyrsgv
    

  • Chain '6':
    Sequence, based on SEQRES records:
    >6wgf6 (6:)
    msspfpadtpssnrpsnsspppssigagfgsssgldsqigsrlhfpsssqphvsnsqtgp
    fvndstqfssqrlqtdgsatndmegneparsfksralnhvkkvddvtgekvreafeqfle
    dfsvqstdtgevekvyraqiefmkiydlntiyidyqhlsmrengalamaiseqyyrflpf
    lqkglrrvvrkyapellntsdslkrsegdegqadedeqqdddmngsslprdsgssaapgn
    gtsamatrsittstspeqtervfqisffnlptvhrirdirsekigsllsisgtvtrtsev
    rpelykasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsrfldwqkvr
    iqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpdvtqlglpgvkpsst
    ldtrgisktteglnsgvtglrslgvrdltykisflachvisigsnigasspdansnnret
    elqmaanlqannvyqdnerdqevflnslssdeinelkemvkdehiydklvrsiapavfgh
    eavkkgillqmlggvhkstvegiklrgdinicvvgdpstsksqflkyvvgfaprsvytsg
    kassaagltaavvrdeeggdytieagalmladngiccidefdkmdisdqvaiheameqqt
    isiakagihatlnartsilaaanpvggrynrklslrgnlnmtapimsrfdlffvilddcn
    ekidtelashivdlhmkrdeaieppfsaeqlrryikyartfkpiltkearsylvekykel
    rkddaqgfsrssyritvrqlesmirlseaiarancvdeitpsfiaeaydllrqsiirvdv
    ddvemdeefdniesqshaasgnnddnddgtgsgvitseppadieegqseatarpgtsekk
    kttvtydkyvsmmnmivrkiaevdregaeeltavdivdwyllqkendlgslaeyweerrl
    afkvikrlvkdrilmeihgtrhnlrdleneenennktvyvihpncevldqlepqdss
    

    Sequence, based on observed residues (ATOM records):
    >6wgf6 (6:)
    vddvtgekvreafeqfledfskvyraqiefmkiydlntiyidyqhlsmrengalamaise
    qyyrflpflqkglrrvvrkyapervfqisffnlptvhrirdirsekigsllsisgtvtrt
    sevrpelyasftcdmcraivdnveqsfkyteptfcpnpscenrafwtlnvtrsfldwqkv
    riqenaneiptgsmprtldvilrgdsverakpgdrckftgveivvpykisflachvisig
    deinelkemvkdehiydklvrsiapavfgheavkkgillqmlggvhkstvegiklrgdin
    icvvgdpstsksqflkyvvgfaprsvytsgkassaagltaavvrdeeggdytieagalml
    adngiccidefdkmdisdqvaiheameqqtisiakagihatlnartsilaaanpvggryn
    rklslrgnlnmtapimsrfdlffvilddcnekidtelashivdlhmkrdeaieppfsaeq
    lrryikyartfkpiltkearsylvekykelrkddaqgfsrssyritvrqlesmirlseai
    arancvdeitpsfiaeaydllrqs
    

  • Chain '7':
    Sequence, based on SEQRES records:
    >6wgf7 (7:)
    msaalpsiqlpvdynnlfneitdflvtfkqdtlssdatrnenedenldaenieqhllekg
    pkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfcra
    idnnmplptkeidykddvldvilnqrrlrnermlsdrtneirsenlmdttmdppssmnda
    lrevvedetelfppnltrryflyfkplsqncarryrkkaisskplsvrqikgdflgqlit
    vrgiitrvsdvkpaveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfm
    straskfsafqeckiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflpapy
    tgfkalkaglltetyleaqfvrqhkkkfasfsltsdveervmelitsgdvynrlaksiap
    eiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpgvaksqllkaickisprg
    vyttgkgssgvgltaavmkdpvtdemileggalvladngiccidefdkmdesdrtaihev
    meqqtisiskaginttlnartsilaaanplygrynprlspldninlpaallsrfdilflm
    ldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyiayaktkrpvmseavndyv
    vqayirlrqdskremdskfsfgqatprtllgiirlsqalaklrladmvdiddveealrlv
    rvskeslyqetnkskedespttkiftiikkmlqetgkntlsyenivktvrlrgftmlqls
    nciqeysylnvwhlinegntlkfvddgtmdtdqedslvstpklapqttasanvsaqdsdi
    dlqda
    

    Sequence, based on observed residues (ATOM records):
    >6wgf7 (7:)
    kgpkymamlqkvanrelnsviidlddilqyqnekflqgtqaddlvsaiqqnanhftelfc
    raidnltrryflyfkplsqncarryrisskplsvrqikgdflgqlitvrgiitrvsdvkp
    aveviaytcdqcgyevfqevnsrtftplsectseecsqnqtkgqlfmstraskfsafqec
    kiqelsqqvpvghiprslnihvngtlvrslspgdivdvtgiflleaqfvrqhdveervme
    litsgdvynrlaksiapeiygnldvkkalllllvggvdkrvgdgmkirgdinvclmgdpg
    vaksqllkaickisprgvyttgkgssgvgltaavmkdpvtdemileggalvladngicci
    defdkmdesdrtaihevmeqqtisiskaginttlnartsilaaanplygrynprlspldn
    inlpaallsrfdilflmldipsrdddeklaehvtyvhmhnkqpdldftpvepskmreyia
    yaktkrpvmseavndyvvqayirlrqdskdskfsfgqatprtllgiirlsqalaklrlad
    mvdiddveealrlvrvskeslyq