PDB entry 6wfz

View 6wfz on RCSB PDB site
Description: crystal structure of fab399 in complex with npna3 peptide from circumsporozoite protein
Deposited on 2020-04-04, released 2020-07-29
The last revision was dated 2021-03-03, with a file datestamp of 2021-02-26.
Experiment type: XRAY
Resolution: 1.84 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fab399 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WFZ (0-End)
  • Chain 'B':
    Compound: Fab399 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WFZ (0-218)
  • Chain 'C':
    Compound: NPNA3 peptide
    Species: PLASMODIUM FALCIPARUM, synthetic [TaxId:5833]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WFZ
  • Chain 'H':
    Compound: Fab399 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WFZ (0-End)
  • Chain 'L':
    Compound: Fab399 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WFZ (0-End)
  • Chain 'P':
    Compound: NPNA3 peptide
    Species: PLASMODIUM FALCIPARUM, synthetic [TaxId:5833]
    Database cross-references and differences (RAF-indexed):
    • PDB 6WFZ
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6wfzA (A:)
evqlvesggglvqpgrslrlscttsgftfgdyamswfrqapgkglewvgfirskgfggta
eyaafvkgrftisrddsrsiaylqmtslkpedtavyycsrvgvviatavywgqgtlvtvs
sastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqs
sglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

    Sequence, based on observed residues (ATOM records):
    >6wfzA (A:)
evqlvesggglvqpgrslrlscttsgftfgdyamswfrqapgkglewvgfirskgfggta
eyaafvkgrftisrddsrsiaylqmtslkpedtavyycsrvgvviatavywgqgtlvtvs
sastkgpsvfplapssgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglys
lssvvtvpssslgtqtyicnvnhkpsntkvdkkvep

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6wfzB (B:)
dilmtqtplslsvtpgqpasisckssqslldndgktylywylqkpgqspqlliyevsnrf
sgvperfsgsgsgtdftlkirrveaedvgvyycmqridlpwtfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6wfzC (C:)
npnanpnanpna

    Sequence, based on observed residues (ATOM records):
    >6wfzC (C:)
npnanpnanpn

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6wfzH (H:)
evqlvesggglvqpgrslrlscttsgftfgdyamswfrqapgkglewvgfirskgfggta
eyaafvkgrftisrddsrsiaylqmtslkpedtavyycsrvgvviatavywgqgtlvtvs
sastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqs
sglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

    Sequence, based on observed residues (ATOM records):
    >6wfzH (H:)
evqlvesggglvqpgrslrlscttsgftfgdyamswfrqapgkglewvgfirskgfggta
eyaafvkgrftisrddsrsiaylqmtslkpedtavyycsrvgvviatavywgqgtlvtvs
sastkgpsvfplapggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkkvep

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6wfzL (L:)
dilmtqtplslsvtpgqpasisckssqslldndgktylywylqkpgqspqlliyevsnrf
sgvperfsgsgsgtdftlkirrveaedvgvyycmqridlpwtfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records):
    >6wfzL (L:)
dilmtqtplslsvtpgqpasisckssqslldndgktylywylqkpgqspqlliyevsnrf
sgvperfsgsgsgtdftlkirrveaedvgvyycmqridlpwtfgqgtkveikrtvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrge

  • Chain 'P':
    Sequence, based on SEQRES records:
    >6wfzP (P:)
npnanpnanpna

    Sequence, based on observed residues (ATOM records):
    >6wfzP (P:)
npnanpnanpn