PDB entry 6wb9

View 6wb9 on RCSB PDB site
Description: structure of the s. cerevisiae er membrane complex
Deposited on 2020-03-26, released 2020-06-03
The last revision was dated 2020-09-02, with a file datestamp of 2020-08-28.
Experiment type: EM
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '0':
    Compound: Endoplasmic reticulum membrane protein complex subunit 10
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
  • Chain '1':
    Compound: ER membrane protein complex subunit 1
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
  • Chain '2':
    Compound: ER membrane protein complex subunit 2
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
  • Chain '3':
    Compound: ER membrane protein complex subunit 3
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
  • Chain '4':
    Compound: ER Membrane Protein Complex Subunit 4
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
  • Chain '5':
    Compound: ER membrane protein complex subunit 5
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
  • Chain '6':
    Compound: ER membrane protein complex subunit 6
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12431
      • conflict (81)
  • Chain '7':
    Compound: Protein SOP4
    Species: Saccharomyces cerevisiae W303 [TaxId:580240]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: POV, NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '0':
    Sequence, based on SEQRES records:
    >6wb90 (0:)
    mlvrllrvillasmvfcadilqlsysddakdaiplgtfeidstsdgnvtvttvniqdvev
    sgeyclnaqiegkldmpcfsymklrtplkydlivdvdednevkqvslsydetndaitatv
    rypeagptapvtklkkktktyadkkasknkdgstaqfeedeevkevswfqknwkmlllgl
    liynfvagsakkqqqggagadqkte
    

    Sequence, based on observed residues (ATOM records):
    >6wb90 (0:)
    dilqlsysddakdaiplgtfeidstsdgnvtvttvniqdvevsgeyclnaqiegkldmpc
    fsymklrtplkydlivdvdednevkqvslsydetndaitatvrypeagptapvtklk
    

  • Chain '1':
    Sequence, based on SEQRES records:
    >6wb91 (1:)
    mkitctdlvyvfillflntscvqavfsddafitdwqlanlgpwekvipdsrdrnrvlils
    nptetsclvssfnvssgqilfrnvlpftideiqldsndhnamvcvnsssnhwqkydlhdw
    flleegvdnapsttilpqssylndqvsiknnelhildeqsklaewklelpqgfnkveyfh
    redplalvlnvndtqymgfsangtelipvwqrdewltnvvdyavldvfdsrdvelnkdmk
    aeldsnslwnaywlrlttnwnrlinllkenqfspgrvftkllaldakdttvsdlkfgfak
    ilivlthdgfiggldmvnkgqliwkldleidqgvkmfwtdknhdelvvfshdghyltiev
    tkdqpiiksrsplserktvdsvirlnehdhqylikfedkdhllfklnpgkntdvpivann
    hssshifvtehdtngiygyiiendtvkqtwkkavnskekmvayskrettnlntlgitlgd
    ksvlykylypnlaaylianeehhtitfnlidtitgeilitqehkdspdfrfpmdivfgey
    wvvysyfssepvpeqklvvvelyesltpderlsnssdnfsydpltghinkpqfqtkqfif
    peiiktmsiskttddittkaivmelengqityipklllnargkpaeemakdkkkefmatp
    ytpvipindnfiithfrnllpgsdsqlisiptnlestsiicdlgldvfctritpsgqfdl
    msptfekgkllitifvllvityfirpsvsnkklksqwlik
    

    Sequence, based on observed residues (ATOM records):
    >6wb91 (1:)
    vfsddafitdwqlanlgpwekvipdsrdrnrvlilsnptetsclvssfnvssgqilfrnv
    lpftideiqldsndhnamvcvnsssnhwqkydlhdwflleegvdnapsttilqgfnkvey
    fhredplalvlnvndtqymgfsangtelipvwqrdewltnvvdyavldvslwnaywlrlt
    tnwnrlinllkenqttvsdlkfgfakilivlthdgfiggldmvnkgqliwkldleidqgv
    kmfwtdknhdelvvfshdghyltievtkdqpiiksrsplserktvdsvirlnehdhqyli
    kfedkdhllfklnshifvtehdtngiygyiiendtvkqtwkkavnskekmvayskrettn
    lntlgitlgdksvlykylypnlaaylianeehhtitfnlidtitgeilitqehkdspdfr
    fpmdivfgeywvvysyfssepvpeqklvvvelyesltpderlsnssdnfsydpltghink
    pqfqtkqfifpeiiktmsiskttddittkaivmelengqityipklllnargkpaeemak
    dkkkefmatpytpvipindnfiithfrnllpgsdsqlisiptnlestsiicdlgldvfct
    ritpsgqfdlmsptfekgkllitifvllvityfirpsvsnkklksqwli
    

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records:
    >6wb92 (2:)
    mlkdlvreklltimntkaytqfnpeqllqlenemkiymksgdsaltegnyfflmemlfyv
    lvyrnqdvdaqvvyntlrdrlgensykmvimkatllqingndkgaieylenllnddleye
    tdfvtyvsiakkliaikttsknlsqesvlkevvaltdkfpldaelwwyaseiyfemgqfe
    kacycleqvlcitpfnyacfgrlsetlyyealrskkqtktellekalknalrsvelsely
    lkgwalvniisrelgrnkqndliklsasklkeisaksnnkdkitaelilnki
    

  • Chain '3':
    Sequence, based on SEQRES records:
    >6wb93 (3:)
    mllddqlkywvllpisivmvltgvlkqyimtlitgssaneaqprvkltewqylqwaqlli
    gnggnlssdafaakkeflvkdlteerhlakakqqdgsqagevpnpfndpsmsnammnmak
    gnmasfipqtiimwwvnhffagfilmqlpfpltakfkemlqtgiicqdldvrwvssiswy
    fisvlglnpvynliglndqdmgiqagiggpqgpqgppqsqvdkamhamandltiiqhetc
    ldnveqrvlkqym
    

    Sequence, based on observed residues (ATOM records):
    >6wb93 (3:)
    mllddqlkywvllpisivmvltgvlkqyimtlitgssaneaqprvkltewqylqwaqlli
    gnggnlssdafaakkeflvkdlteenmasfipqtiimwwvnhffagfilmqlpfpltakf
    kemlqtgiicqdldvrwvssiswyfisvlglnpvynliglndqqvdkamhamandltiiq
    hetcldnveqrvlkqym
    

  • Chain '4':
    Sequence, based on SEQRES records:
    >6wb94 (4:)
    mseqepyewakhlldtkyiekyniqnsntlpsppgfegnsskgnvtrkqqdatsqttsla
    qknqitvlqvqkawqialqpaksipmnifmsymsgtslqiipimtalmllsgpikaifst
    rsafkpvlgnkatqsqvqtamfmyivfqgvlmyigyrklnsmglipnakgdwlpweriah
    ynnglqwfsd
    

    Sequence, based on observed residues (ATOM records):
    >6wb94 (4:)
    qepyewakhlldtkyiekyniqnsntlpsppgfqknqitvlqvqkawqialqpaksipmn
    ifmsymsgtslqiipimtalmllsgpikaitqsqvqtamfmyivfqgvlmyigyrklnsm
    glipnakgdwlpweriahynnglqwfsd
    

  • Chain '5':
    Sequence, based on SEQRES records:
    >6wb95 (5:)
    msfvskllytvsalvlfhsgfssyefhhllklnslnnaqgaisklpkdimyetyaglilf
    vlavftsfeklqylpiesndgkiisqgnylkeialnkatnvdnligsnpngeiiftpsfv
    dvhmkrkicrewasntvkkek
    

    Sequence, based on observed residues (ATOM records):
    >6wb95 (5:)
    sfvskllytvsalvlfhsgfssyefhhllklnslisklpkdimyetyaglilfvlavfts
    feklqylpiesndgkiisqgnylkeialnkatnvdnligsnpngeiiftpsfvdvhmkrk
    icrewasn
    

  • Chain '6':
    Sequence, based on SEQRES records:
    >6wb96 (6:)
    mssneevftqinatanvvdnkkrllfvqdssalvlglvagflqiesvhgfiwflilynli
    nviyivwicqlqpgkfyqsplqdiffesffreitgfvmawtfgyalig
    

    Sequence, based on observed residues (ATOM records):
    >6wb96 (6:)
    qinatanvvdnkkrllfvqdssalvlglvagflqiesvhgfiwflilynlinviyivwic
    qlqpgkfyqsplqdiffesffreitgfvmawtfgyali
    

  • Chain '7':
    Sequence, based on SEQRES records:
    >6wb97 (7:)
    mfsqivlllsafiyvasatarrgtikgrldlaasnitgfvstrtsfklyqignfsteypy
    tsttmfqddegnfefanlplndgvnettyyvmypasmdfnlkpnriliefknlengtlql
    nafknffgreyfpskditypeklqsmkvhpyitvellhkapirsylqarnvsifstgivg
    nilnsrwklagvitlialvvfpiivekldpetaraireeakrkqrekyaavask
    

    Sequence, based on observed residues (ATOM records):
    >6wb97 (7:)
    rrgtikgrldlaasnitgfvstrtsfklyqignfsteypytsttmfqddegnfefanlpl
    ndgvnettyyvmypasmdfnlkpnriliefknlengtlqlnafknffgreyfpskdilqs
    mkvhpyhkapirsylqarnvsi