PDB entry 6wag

View 6wag on RCSB PDB site
Description: crystal structure of smcr s76a from vibrio vulnificus
Deposited on 2020-03-25, released 2020-06-17
The last revision was dated 2021-06-30, with a file datestamp of 2021-06-25.
Experiment type: XRAY
Resolution: 2.58 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: LuxR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Gene: smcR, vvpR, CRN32_08135, CRN52_17705, D8T54_02235, D8T65_23975, JS86_16400
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9L8G8 (Start-224)
      • engineered mutation (95)
  • Chain 'B':
    Compound: LuxR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Gene: smcR, vvpR, CRN32_08135, CRN52_17705, D8T54_02235, D8T65_23975, JS86_16400
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9L8G8
      • engineered mutation (95)
  • Chain 'C':
    Compound: LuxR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Gene: smcR, vvpR, CRN32_08135, CRN52_17705, D8T54_02235, D8T65_23975, JS86_16400
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9L8G8 (Start-224)
      • engineered mutation (95)
  • Chain 'D':
    Compound: LuxR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Gene: smcR, vvpR, CRN32_08135, CRN52_17705, D8T54_02235, D8T65_23975, JS86_16400
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9L8G8
      • engineered mutation (95)
  • Heterogens: EDO, SO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6wagA (A:)
mgsshhhhhhssglvprgshmdsiakrprtrlsplkrkqqlmeialevfarrgigrggha
diaeiaqvsvatvfnyfptredlvdevlnhvvrqfanflsdnidldlhakenianitnam
ielvvqdnhwlkvwfewsastrdevwplfvttnrtnqllvqnmfikaiergevcdqhnpe
dlanlfhgicyslfvqanrtnntaelsklvssyldmlciykrehe

    Sequence, based on observed residues (ATOM records):
    >6wagA (A:)
akrprtrlsplkrkqqlmeialevfarrgigrgghadiaeiaqvsvatvfnyfptredlv
devlnhvvrqfanflsdnidldlhakenianitnamielvvqdnhwlkvwfewsastrde
vwplfvttnrtnqllvqnmfikaiergevcdqhnpedlanlfhgicyslfvqanrtnnta
elsklvssyldmlciykrehe

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6wagB (B:)
mgsshhhhhhssglvprgshmdsiakrprtrlsplkrkqqlmeialevfarrgigrggha
diaeiaqvsvatvfnyfptredlvdevlnhvvrqfanflsdnidldlhakenianitnam
ielvvqdnhwlkvwfewsastrdevwplfvttnrtnqllvqnmfikaiergevcdqhnpe
dlanlfhgicyslfvqanrtnntaelsklvssyldmlciykrehe

    Sequence, based on observed residues (ATOM records):
    >6wagB (B:)
dsiakrprtrlsplkrkqqlmeialevfarrgigrgghadiaeiaqvsvatvfnyfptre
dlvdevlnhvvrqfanflsdnidldlhakenianitnamielvvqdnhwlkvwfewsast
rdevwplfvttnrtnqllvqnmfikaiergevcdqhnpedlanlfhgicyslfvqanrtn
ntaelsklvssyldmlciykre

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6wagC (C:)
mgsshhhhhhssglvprgshmdsiakrprtrlsplkrkqqlmeialevfarrgigrggha
diaeiaqvsvatvfnyfptredlvdevlnhvvrqfanflsdnidldlhakenianitnam
ielvvqdnhwlkvwfewsastrdevwplfvttnrtnqllvqnmfikaiergevcdqhnpe
dlanlfhgicyslfvqanrtnntaelsklvssyldmlciykrehe

    Sequence, based on observed residues (ATOM records):
    >6wagC (C:)
siakrprtrlsplkrkqqlmeialevfarrgigrgghadiaeiaqvsvatvfnyfptred
lvdevlnhvvrqfanflsdnidldlhakenianitnamielvvqdnhwlkvwfewsastr
devwplfvttnrtnqllvqnmfikaiergevcdqhnpedlanlfhgicyslfvqanrtnn
taelsklvssyldmlciykrehe

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6wagD (D:)
mgsshhhhhhssglvprgshmdsiakrprtrlsplkrkqqlmeialevfarrgigrggha
diaeiaqvsvatvfnyfptredlvdevlnhvvrqfanflsdnidldlhakenianitnam
ielvvqdnhwlkvwfewsastrdevwplfvttnrtnqllvqnmfikaiergevcdqhnpe
dlanlfhgicyslfvqanrtnntaelsklvssyldmlciykrehe

    Sequence, based on observed residues (ATOM records):
    >6wagD (D:)
akrprtrlsplkrkqqlmeialevfarrgigrgghadiaeiaqvsvatvfnyfptredlv
devlnhvvrqfanflsdnidldlhakenianitnamielvvqdnhwlkvwfewsastrde
vwplfvttnrtnqllvqnmfikaiergevcdqhnpedlanlfhgicyslfvqanrtnnta
elsklvssyldmlciykre