PDB entry 6w5v

View 6w5v on RCSB PDB site
Description: npc1-npc2 complex structure at ph 5.5
Deposited on 2020-03-13, released 2020-06-17
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-17.
Experiment type: EM
Resolution: 4 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NPC intracellular cholesterol transporter 1
    Species: Homo sapiens [TaxId:9606]
    Gene: NPC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: NPC intracellular cholesterol transporter 2
    Species: Homo sapiens [TaxId:9606]
    Gene: NPC2, HE1
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CLR, NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6w5vA (A:)
    mtarglalgllllllcpaqvfsqscvwygecgiaygdkrynceysgppkplpkdgydlvq
    elcpgfffgnvslccdvrqlqtlkdnlqlplqflsrcpscfynllnlfceltcsprqsqf
    lnvtatedyvdpvtnqtktnvkelqyyvgqsfanamynacrdveapssndkalgllcgkd
    adacnatnwieymfnkdngqapftitpvfsdfpvhgmepmnnatkgcdesvdevtapcsc
    qdcsivcgpkpqpppppapwtilgldamyvimwitymafllvffgaffavwcyrkryfvs
    eytpidsniafsvnasdkgeasccdpvsaafegclrrlftrwgsfcvrnpgcviffslvf
    itacssglvfvrvttnpvdlwsapssqarlekeyfdqhfgpffrteqliirapltdkhiy
    qpypsgadvpfgppldiqilhqvldlqiaienitasydnetvtlqdiclaplspyntnct
    ilsvlnyfqnshsvldhkkgddffvyadyhthflycvrapaslndtsllhdpclgtfggp
    vfpwlvlggyddqnynnatalvitfpvnnyyndteklqraqawekefinfvknyknpnlt
    isftaersiedelnresdsdvftvvisyaimflyislalghmkscrrllvdskvslgiag
    ilivlssvacslgvfsyiglpltlivievipflvlavgvdnifilvqayqrderlqgetl
    dqqlgrvlgevapsmflssfsetvafflgalsvmpavhtfslfaglavfidfllqitcfv
    sllgldikrqeknrldifccvrgaedgtsvqasesclfrffknsysplllkdwmrpivia
    ifvgvlsfsiavlnkvdigldqslsmpddsymvdyfksisqylhagppvyfvleeghdyt
    sskgqnmvcggmgcnndslvqqifnaaqldnytrigfapsswiddyfdwvkpqssccrvd
    nitdqfcnasvvdpacvrcrpltpegkqrpqggdfmrflpmflsdnpnpkcgkgghaays
    savnillghgtrvgatyfmtyhtvlqtsadfidalkkarliasnvtetmgingsayrvfp
    ysvfyvfyeqyltiiddtifnlgvslgaiflvtmvllgcelwsavimcatiamvlvnmfg
    vmwlwgislnavslvnlvmscgisvefcshitraftvsmkgsrveraeealahmgssvfs
    gitltkfggivvlafaksqifqifyfrmylamvllgathgliflpvllsyigpsvnkaks
    cateerykgtererllnflegsdevdagshhhhhhhhhhgsvedykddddk
    

    Sequence, based on observed residues (ATOM records):
    >6w5vA (A:)
    qscvwygecgiaygdkrynceysgppkplpkdgydlvqelcpgfffgnvslccdvrqlqt
    lkdnlqlplqflsrcpscfynllnlfceltcsprqsqflnvtatedyvdpvtnqtktnvk
    elqyyvgqsfanamynacrdveapssndkalgllcgkdadacnatnwieymfnkdngqap
    ftitpvfsdfpvhgmepmnnatkgcdesvdevtapcscqdcsivcgpkpqpppppapwti
    lgldamyvimwitymafllvffgaffavwcyrkpvsaafegclrrlftrwgsfcvrnpgc
    viffslvfitacssglvfvrvttnpvdlwsapssqarlekeyfdqhfgpffrteqliira
    pltdkhiyqpypsgadvpfgppldiqilhqvldlqiaienitasydnetvtlqdiclapl
    spyntnctilsvlnyfqnshsvldhkkgddffvyadyhthflycvrapaslndtsllhdp
    clgtfggpvfpwlvlggyddqnynnatalvitfpvnnyyndteklqraqawekefinfvk
    nyknpnltisftaersiedelnresdsdvftvvisyaimflyislalghvdskvslgiag
    ilivlssvacslgvfsyiglpltlivievipflvlavgvdnifilvqayqrderlqgetl
    dqqlgrvlgevapsmflssfsetvafflgalsvmpavhtfslfaglavfidfllqitcfv
    sllgldikrqeknrsclfrffknsysplllkdwmrpiviaifvgvlsfsiavlnkvdigl
    dqslsmpddsymvdyfksisqylhagppvyfvleeghdytsskgqnmvcggmgcnndslv
    qqifnaaqldnytrigfapsswiddyfdwvkpqssccrvdnitdqfcnasvvdpacvrcr
    pltpegkqrpqggdfmrflpmflsdnpnpkcgkgghaayssavnillghgtrvgatyfmt
    yhtvlqtsadfidalkkarliasnvtetmgingsayrvfpysvfyvfyeqyltiiddtif
    nlgvslgaiflvtmvllgcelwsavimcatiamvlvnmfgvmwlwgislnavslvnlvms
    cgisvefcshitraftvsmkgsrveraeealahmgssvfsgitltkfggivvlafaksqi
    fqifyfrmylamvllgathgliflpvllsyigpsv
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6w5vD (D:)
    mrflaatflllalstaaqaepvqfkdcgsvdgvikevnvspcptqpcqlskgqsysvnvt
    ftsniqsksskavvhgilmgvpvpfpipepdgcksgincpiqkdktysylnklpvkseyp
    siklvvewqlqddknqslfcweipvqivshllehhhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6w5vD (D:)
    epvqfkdcgsvdgvikevnvspcptqpcqlskgqsysvnvtftsniqsksskavvhgilm
    gvpvpfpipepdgcksgincpiqkdktysylnklpvkseypsiklvvewqlqddknqslf
    cweipvqivshl