PDB entry 6w52

View 6w52 on RCSB PDB site
Description: prefusion rsv f bound by neutralizing antibody rsb1
Deposited on 2020-03-12, released 2020-11-11
The last revision was dated 2020-11-11, with a file datestamp of 2020-11-06.
Experiment type: XRAY
Resolution: 3.74 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fusion glycoprotein F0
    Species: Human respiratory syncytial virus A (strain A2) [TaxId:11259]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Fusion glycoprotein F1 fused with Fibritin trimerization domain
    Species: Escherichia phage T2 [TaxId:2060721]
    Gene: WAC
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2H4WLA4 (0-End)
      • conflict (15)
      • conflict (18)
      • conflict (53)
      • conflict (70)
      • conflict (153)
    • Uniprot A0A2Z5WL46
  • Chain 'H':
    Compound: RSB1 Fab Heavy Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6W52
  • Chain 'L':
    Compound: RSB1 Fab Light Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6W52

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6w52A (A:)
qniteefyqstcsavskgylsalrtgwytsvitielsnikenkcngtdakvklikqeldk
yknavtelqllmqstpatnnra

    Sequence, based on observed residues (ATOM records):
    >6w52A (A:)
qniteefyqstcsavskgylsalrtgwytsvitielsnikenkcngtdakvklikqeldk
yknavtelqllm

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6w52B (B:)
flgfllgvgsaiasgvavckvlhlegevnkiksallstnkavvslsngvsvltfkvldlk
nyidkqllpilnkqscsisnietviefqqknnrlleitrefsvnagvttpvstymltnse
llslindmpitndqkklmsnnvqivrqqsysimciikeevlayvvqlplygvidtpcwkl
htsplcttntkegsnicltrtdrgwycdnagsvsffpqaetckvqsnrvfcdtmnsltlp
sevnlcnvdifnpkydckimtsktdvsssvitslgaivscygktkctasnknrgiiktfs
ngcdyvsnkgvdtvsvgntlyyvnkqegkslyvkgepiinfydplvfpsdefdasisqvn
ekinqslafirksdellsaiggyipeaprdgqayvrkdgewvllstflgglvpr

    Sequence, based on observed residues (ATOM records):
    >6w52B (B:)
flgfllgvgsaiasgvavckvlhlegevnkiksallstnkavvslsngvsvltfkvldlk
nyidkqllpilnkqscsisnietviefqqknnrlleitrefsvnagvttpvstymltnse
llslindmpitndqkklmsnnvqivrqqsysimciikeevlayvvqlplygvidtpcwkl
htsplcttntkegsnicltrtdrgwycdnagsvsffpqaetckvqsnrvfcdtmnsltlp
sevnlcnvdifnpkydckimtsktdvsssvitslgaivscygktkctasnknrgiiktfs
ngcdyvsnkgvdtvsvgntlyyvnkqegkslyvkgepiinfydplvfpsdefdasisqvn
ekinqslafirks

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6w52H (H:)
mefglswvflvailegvhcqvqlvqsgaevkkpgssvkvscktsggtygtysinwvrqap
gqglewmgaiipifgktnyaqkfqgrvtitadaststaymelgsltsedtamyycarved
taldhyfdywgqgalvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvs
wnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvep
kscdkgsenlyfqggwshpqfekgggsgggsgggswshpqfek

    Sequence, based on observed residues (ATOM records):
    >6w52H (H:)
qvqlvqsgaevkkpgssvkvscktsggtygtysinwvrqapgqglewmgaiipifgktny
aqkfqgrvtitadaststaymelgsltsedtamyycarvedtaldhyfdywgqgalvtvs
sastkgpsvfplapgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysls
svvtvpssslgtqtyicnvnhkpsntkvdkrvep

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6w52L (L:)
metpaellfllllwlpdttgqsaltqprsvsgspgqsvtisctgtsgdvgtynyvswyqq
lpgkapklmiydvtrrpsgvpdrfsgsksgntasltisglqaddeadyyccsyagtltwv
fgggtkltvlgqpkaapsvtlfppsseelqankatlvclisdfypgavtvawkadsspvk
agvetttpskqsnnkyaassylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records):
    >6w52L (L:)
qsaltqprsvsgspgqsvtisctgtsgdvgtynyvswyqqlpgkapklmiydvtrrpsgv
pdrfsgsksgntasltisglqaddeadyyccsyagtltwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvapt