PDB entry 6w22

View 6w22 on RCSB PDB site
Description: clpa engaged1 state bound to repa-gfp (clpa focused refinement)
Deposited on 2020-03-04, released 2020-04-29
The last revision was dated 2020-05-27, with a file datestamp of 2020-05-22.
Experiment type: EM
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ATP-dependent clp protease ATP-binding subunit clpa
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: clpA, lopD, b0882, JW0866
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: ATP-dependent clp protease ATP-binding subunit clpa
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: clpA, lopD, b0882, JW0866
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: ATP-dependent clp protease ATP-binding subunit clpa
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: clpA, lopD, b0882, JW0866
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: ATP-dependent clp protease ATP-binding subunit clpa
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: clpA, lopD, b0882, JW0866
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: ATP-dependent clp protease ATP-binding subunit clpa
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: clpA, lopD, b0882, JW0866
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: ATP-dependent clp protease ATP-binding subunit clpa
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: clpA, lopD, b0882, JW0866
    Database cross-references and differences (RAF-indexed):
  • Chain 'X':
    Compound: RepA, green fluorescent protein fusion
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6W22 (0-23)
  • Heterogens: ATP, ADP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6w22A (A:)
mlnqelelslnmafararehrhefmtvehlllallsnpsarealeacsvdlvalrqelea
fieqttpvlpaseeerdtqptlsfqrvlqravfhvqssgrnevtganvlvaifseqesqa
ayllrkhevsrldvvnfishgtrkdeptqssdpgsqpnseeqaggeermenfttnlnqla
rvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaeglawrivqgdvpevm
adctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideihtiigagaasggq
vdaanlikpllssgkirvigsttyqefsnifekdralarrfqkiditepsieetvqiing
lkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagararlmpvskrkkt
vnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaiealteaikmarag
lghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerhtvsrligappgy
vgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltdnngrkadfrnvv
lvmttnagvreterksiglihqdnstdameeikkiftpefrnrldniiwfdhlstdvihq
vvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarviqdnlkkplanel
lfgslvdggqvtvaldkekneltygfqsaqkhkaeaah

    Sequence, based on observed residues (ATOM records):
    >6w22A (A:)
menfttnlnqlarvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaegla
wrivqgdvpevmadctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideih
tiigagaasggqvdaanlikpllssgkirvigsttyqefsnifekdralarrfqkidite
psieetvqiinglkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagar
arlmpvskrkktvnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaie
alteaikmaraglghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerh
tvsrligappgyvgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltd
nngrkadfrnvvlvmttnagvreterksiglihqdnstdameeikkiftpefrnrldnii
wfdhlstdvihqvvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarvi
qdnlkkplanellfgslvdggqvtvaldkekneltygf

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6w22B (B:)
mlnqelelslnmafararehrhefmtvehlllallsnpsarealeacsvdlvalrqelea
fieqttpvlpaseeerdtqptlsfqrvlqravfhvqssgrnevtganvlvaifseqesqa
ayllrkhevsrldvvnfishgtrkdeptqssdpgsqpnseeqaggeermenfttnlnqla
rvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaeglawrivqgdvpevm
adctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideihtiigagaasggq
vdaanlikpllssgkirvigsttyqefsnifekdralarrfqkiditepsieetvqiing
lkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagararlmpvskrkkt
vnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaiealteaikmarag
lghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerhtvsrligappgy
vgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltdnngrkadfrnvv
lvmttnagvreterksiglihqdnstdameeikkiftpefrnrldniiwfdhlstdvihq
vvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarviqdnlkkplanel
lfgslvdggqvtvaldkekneltygfqsaqkhkaeaah

    Sequence, based on observed residues (ATOM records):
    >6w22B (B:)
menfttnlnqlarvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaegla
wrivqgdvpevmadctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideih
tiigagaasggqvdaanlikpllssgkirvigsttyqefsnifekdralarrfqkidite
psieetvqiinglkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagar
arlmpvskrkktvnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaie
alteaikmaraglghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerh
tvsrligappgyvgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltd
nngrkadfrnvvlvmttnagvreterksiglihqdnstdameeikkiftpefrnrldnii
wfdhlstdvihqvvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarvi
qdnlkkplanellfgslvdggqvtvaldkekneltygf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6w22C (C:)
mlnqelelslnmafararehrhefmtvehlllallsnpsarealeacsvdlvalrqelea
fieqttpvlpaseeerdtqptlsfqrvlqravfhvqssgrnevtganvlvaifseqesqa
ayllrkhevsrldvvnfishgtrkdeptqssdpgsqpnseeqaggeermenfttnlnqla
rvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaeglawrivqgdvpevm
adctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideihtiigagaasggq
vdaanlikpllssgkirvigsttyqefsnifekdralarrfqkiditepsieetvqiing
lkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagararlmpvskrkkt
vnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaiealteaikmarag
lghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerhtvsrligappgy
vgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltdnngrkadfrnvv
lvmttnagvreterksiglihqdnstdameeikkiftpefrnrldniiwfdhlstdvihq
vvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarviqdnlkkplanel
lfgslvdggqvtvaldkekneltygfqsaqkhkaeaah

    Sequence, based on observed residues (ATOM records):
    >6w22C (C:)
menfttnlnqlarvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaegla
wrivqgdvpevmadctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideih
tiigagaasggqvdaanlikpllssgkirvigsttyqefsnifekdralarrfqkidite
psieetvqiinglkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagar
arlmpvskrkktvnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaie
alteaikmaraglghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerh
tvsrligappgyvgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltd
nngrkadfrnvvlvmttnagvreterksiglihqdnstdameeikkiftpefrnrldnii
wfdhlstdvihqvvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarvi
qdnlkkplanellfgslvdggqvtvaldkekneltygf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6w22D (D:)
mlnqelelslnmafararehrhefmtvehlllallsnpsarealeacsvdlvalrqelea
fieqttpvlpaseeerdtqptlsfqrvlqravfhvqssgrnevtganvlvaifseqesqa
ayllrkhevsrldvvnfishgtrkdeptqssdpgsqpnseeqaggeermenfttnlnqla
rvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaeglawrivqgdvpevm
adctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideihtiigagaasggq
vdaanlikpllssgkirvigsttyqefsnifekdralarrfqkiditepsieetvqiing
lkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagararlmpvskrkkt
vnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaiealteaikmarag
lghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerhtvsrligappgy
vgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltdnngrkadfrnvv
lvmttnagvreterksiglihqdnstdameeikkiftpefrnrldniiwfdhlstdvihq
vvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarviqdnlkkplanel
lfgslvdggqvtvaldkekneltygfqsaqkhkaeaah

    Sequence, based on observed residues (ATOM records):
    >6w22D (D:)
menfttnlnqlarvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaegla
wrivqgdvpevmadctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideih
tiigagaasggqvdaanlikpllssgkirvigsttyqefsnifekdralarrfqkidite
psieetvqiinglkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagar
arlmpvskrkktvnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaie
alteaikmaraglghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerh
tvsrligappgyvgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltd
nngrkadfrnvvlvmttnagvreterksiglihqdnstdameeikkiftpefrnrldnii
wfdhlstdvihqvvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarvi
qdnlkkplanellfgslvdggqvtvaldkekneltygf

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6w22E (E:)
mlnqelelslnmafararehrhefmtvehlllallsnpsarealeacsvdlvalrqelea
fieqttpvlpaseeerdtqptlsfqrvlqravfhvqssgrnevtganvlvaifseqesqa
ayllrkhevsrldvvnfishgtrkdeptqssdpgsqpnseeqaggeermenfttnlnqla
rvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaeglawrivqgdvpevm
adctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideihtiigagaasggq
vdaanlikpllssgkirvigsttyqefsnifekdralarrfqkiditepsieetvqiing
lkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagararlmpvskrkkt
vnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaiealteaikmarag
lghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerhtvsrligappgy
vgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltdnngrkadfrnvv
lvmttnagvreterksiglihqdnstdameeikkiftpefrnrldniiwfdhlstdvihq
vvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarviqdnlkkplanel
lfgslvdggqvtvaldkekneltygfqsaqkhkaeaah

    Sequence, based on observed residues (ATOM records):
    >6w22E (E:)
menfttnlnqlarvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaegla
wrivqgdvpevmadctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideih
tiigagaasggqvdaanlikpllssgkirvigsttyqefsnifekdralarrfqkidite
psieetvqiinglkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagar
arlmpvskrkktvnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaie
alteaikmaraglghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerh
tvsrligappgyvgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltd
nngrkadfrnvvlvmttnagvreterksiglihqdnstdameeikkiftpefrnrldnii
wfdhlstdvihqvvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarvi
qdnlkkplanellfgslvdggqvtvaldkekneltygf

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6w22F (F:)
mlnqelelslnmafararehrhefmtvehlllallsnpsarealeacsvdlvalrqelea
fieqttpvlpaseeerdtqptlsfqrvlqravfhvqssgrnevtganvlvaifseqesqa
ayllrkhevsrldvvnfishgtrkdeptqssdpgsqpnseeqaggeermenfttnlnqla
rvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaeglawrivqgdvpevm
adctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideihtiigagaasggq
vdaanlikpllssgkirvigsttyqefsnifekdralarrfqkiditepsieetvqiing
lkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagararlmpvskrkkt
vnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaiealteaikmarag
lghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerhtvsrligappgy
vgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltdnngrkadfrnvv
lvmttnagvreterksiglihqdnstdameeikkiftpefrnrldniiwfdhlstdvihq
vvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarviqdnlkkplanel
lfgslvdggqvtvaldkekneltygfqsaqkhkaeaah

    Sequence, based on observed residues (ATOM records):
    >6w22F (F:)
menfttnlnqlarvggidpligrekeleraiqvlcrrrknnpllvgesgvgktaiaegla
wrivqgdvpevmadctiysldigsllagtkyrgdfekrfkallkqleqdtnsilfideih
tiigagaasggqvdaanlikpllssgkirvigsttyqefsnifekdralarrfqkidite
psieetvqiinglkpkyeahhdvrytakavraavelavkyindrhlpdkaidvideagar
arlmpvskrkktvnvadiesvvariaripeksvsqsdrdtlknlgdrlkmlvfgqdkaie
alteaikmaraglghehkpvgsflfagptgvgktevtvqlskalgiellrfdmseymerh
tvsrligappgyvgfdqgglltdavikhphavllldeiekahpdvfnillqvmdngtltd
nngrkadfrnvvlvmttnagvreterksiglihqdnstdameeikkiftpefrnrldnii
wfdhlstdvihqvvdkfivelqvqldqkgvslevsqearnwlaekgydramgarpmarvi
qdnlkkplanellfgslvdggqvtvaldkekneltygf

  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records:
    >6w22X (X:)
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