PDB entry 6w18

View 6w18 on RCSB PDB site
Description: structure of s. pombe arp2/3 complex in inactive state
Deposited on 2020-03-03, released 2020-08-12
The last revision was dated 2020-11-18, with a file datestamp of 2020-11-13.
Experiment type: EM
Resolution: 4.2 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Actin-related protein 3
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Actin-related Protein 2
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Actin-related protein 2/3 complex subunit 1
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Actin-related protein 2/3 complex subunit 2
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Actin-related protein 2/3 complex subunit 3
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Actin-related protein 2/3 complex subunit 4
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Actin-related protein 2/3 complex subunit 5
    Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ATP, MG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6w18A (A:)
    masfnvpiimdngtgysklgyagndapsyvfptviatrsagassgpavsskpsymaskgs
    ghlsskratedldffigndalkkasagysldypirhgqienwdhmerfwqqslfkylrce
    pedhyflltepplnppenrentaeimfesfncaglyiavqavlalaaswtsskvtdrslt
    gtvvdsgdgvthiipvaegyvigssiktmplagrdvtyfvqsllrdrnepdsslktaeri
    keeccyvcpdivkefsrfdrepdrylkyasesitghsttidvgferflapeiffnpeias
    sdfltplpelvdnvvqsspidvrkglyknivlsggstlfknfgnrlqrdlkrivderihr
    semlsgaksggvdvnvishkrqrnavwfggsllaqtpefgsychtkadyeeygasiarry
    qifgnsl
    

    Sequence, based on observed residues (ATOM records):
    >6w18A (A:)
    asfnvpiimdngtgysklgyagndapsyvfptviatratedldffigndalkkasagysl
    dypirhgqienwdhmerfwqqslfkylrcepedhyflltepplnppenrentaeimfesf
    ncaglyiavqavlalaaswtsskvtdrsltgtvvdsgdgvthiipvaegyvigssiktmp
    lagrdvtyfvqsllrlktaerikeeccyvcpdivkefsrfdrlkyasidvgferflapei
    ffnpeiassdfltplpelvdnvvqsspidvrkglyknivlsggstlfknfgnrlqrdlkr
    ivderihrsemlsgaksggvdvnvishkrqrnavwfggsllaqtpefgsychtkadyeey
    gasiarryqi
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6w18B (B:)
    mesapivldngtgfvkvgyakdnfprfqfpsivgrpilraeektgnvqikdvmvgdeaea
    vrsllqvkypmengiirdfeemnqlwdytffeklkidprgrkillteppmnpvanrekmc
    etmferygfggvyvaiqavlslyaqglssgvvvdsgdgvthivpvyesvvlnhlvgrldv
    agrdatrylislllrkgyafnrtadfetvremkeklcyvsydleldhklseettvlmrny
    tlpdgrvikvgseryecpeclfqphlvgseqpglsefifdtiqaadvdirkylyraivls
    ggssmyaglpsrlekeikqlwfervlhgdparlpnfkvkiedaprrrhavfiggavladi
    maqndhmwvskaeweeygvraldklgprtt
    

    Sequence, based on observed residues (ATOM records):
    >6w18B (B:)
    ivldngtgfvkvgyakdnfprfqfpsivgrpikdvmvgdeaeavrsllqvkypmengiir
    dfeemnqlwdytffeklkidprgrkillteppmnpvanrekmcetmferygfggvyvaiq
    avlslyaqglssgvvvdsgdgvthivpvyesvvlnhlvgrldvagrdatrylislllrkg
    yafnrtadfetvremkeklcyvsydleldhklseettvlmrnytlpdgrvikvgseryec
    peclfqphlvgseqpglsefifdtiqaadvdirkylyraivlsggssmyaglpsrlekei
    kqlwfervlhgdparlpnfkvkiedaprrrhavfiggavladimaqndhmwvskaeweey
    gvraldk
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6w18C (C:)
    matsqvlhilpkpsyehafnsqrtefvtttatnqvelyeqdgngwkhartfsdhdkivtc
    vdwapksnrivtcsqdrnayvyekrpdgtwkqtlvllrlnraatfvrwspnedkfavgsg
    arvisvcyfeqendwwvskhlkrplrstilsldwhpnnvllaagcadrkayvlsayvrdv
    dakpeasvwgsrlpfntvcaeypsggwvhavgfspsgnalayaghdssvtiaypsapeqp
    pralitvklsqlplrsllwanesaivaagynyspillqgnesgwahtrdldagtsktsft
    htgntgegreeegpvsftalrstfrnmdlkgssqsisslptvhqnmiatlrpyagtpgni
    taftssgtdgrvvlwtl
    

    Sequence, based on observed residues (ATOM records):
    >6w18C (C:)
    atsqvlhilpkpsyehafnsqrtefvtttatnqvelyeqdgngwkhartfsdhdkivtcv
    dwapksnrivtcsqdrnayvyekrpdgtwkqtlvllrlnraatfvrwspnedkfavgsga
    rvisvcyfeqendwwvskhlkrplrstilsldwhpnnvllaagcadrkayvlsayvrdvd
    akpeasvwgsrlpfntvcaeypsggwvhavgfspsgnalayaghdssvtiaypsapeqpp
    ralitvklsqlplrsllwanesaivaagynyspillqgnesgwahtrdldagtslptvhq
    nmiatlrpyagtpgnitaftssgtdgrvvlwtl
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6w18D (D:)
    mlsldynnifiyellterfssenpssidqvvtdfdgvtfhistpeektkilislsmkcyp
    elvnygtldllkqiygayvhepemgynfsilidlqqlpatdeekeqlamsismlkrnvla
    apfhraftkqaeladlarkdpenapmldkqatsqelmaihyrdeetivlwpehdrvtvvf
    stkfreetdrifgkvflqefvdarrrpaiqtapqvlfsyrdppleirdiqgiqkgddfgf
    vtfvlferhftpqnredcishiqvfrntlhfhikaskaymhqrmrkrvadfqkvlnrakp
    dvelerktatgrsfvra
    

    Sequence, based on observed residues (ATOM records):
    >6w18D (D:)
    mlsldynnifiyellterfssenpssidqvvtdfdgvtfhistpeektkiliscypelvn
    ygtldllkqiygayvhepemgynfsilidlqqlpatdeekeqlamsismlkrnvlaapfh
    raftkqaeladlarkdpenapmldkqatsqelmaihyrdeetivlwpehdrvtvvfstkf
    reetdrifgkvflqefvdarrrpaiqtapqvlfsyrdppleirdiqgiqkgddfgfvtfv
    lferhftpqnredcishiqvfrntlhfhikaskaymhqrmrkrvadfqkvlnrakp
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6w18E (E:)
    mpayhssflsltdvpttgniamlplktkfrgpaypadesqmdiideciglfrancffrnf
    eikgpadrtliygtlfiseclgrvnglnyrdaerqlnslalenfsipgsagfplnalyap
    plspqdaeimrtyltqfrqelayrllshvyatekdhpskwwtcfskrrfmnkal
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6w18F (F:)
    msntlrpylnavrstltaslaleefsseiverqsqpevevgrspeillkplvvsrneqeq
    cliessvnsvrfsirikqvdeierilvrkfmqflmgraesffilrrkpvqgydisflitn
    yhteemlkhklvdfiiefmeevdaeisemklflngrarlvaetylscf
    

    Sequence, based on observed residues (ATOM records):
    >6w18F (F:)
    ntlrpylnavrstltaslaleefsseiverqsqpevevgrspeillkplvvsrneqeqcl
    iessvnsvrfsirikqvdeierilvrkfmqflmgraesffilrrkpvqgydisflitnyh
    teemlkhklvdfiiefmeevdaeisemklflngrarlvaetylscf
    

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6w18G (G:)
    mtfrtldvdsitepvlteqdifpirnetaeqvqaavsqlipqarsaiqtgnalqglktll
    syvpygndvqevrtqylnafvdvlsniraadipafvkecsteeidnivnfiyrglanpqa
    ynssvllnwhekvveisgigcivrvlnsrpdl
    

    Sequence, based on observed residues (ATOM records):
    >6w18G (G:)
    teqdifpirnetaeqvqaavsqlipqarsailqglktllsyvpygndvqevrtqylnafv
    dvlsniraadipafvkecsteeidnivnfiyrglanpqaynssvllnwhekvveisgigc
    ivrvlnsrpdl