PDB entry 6vzr

View 6vzr on RCSB PDB site
Description: engineered ttll6 bound to the initiation analog
Deposited on 2020-02-28, released 2020-08-12
The last revision was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tubulin polyglutamylase TTLL6
    Species: Mus musculus [TaxId:10090]
    Gene: Ttll6
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4Q9E8
      • engineered mutation (128-129)
      • engineered mutation (311)
  • Chain 'B':
    Compound: Tubulin polyglutamylase TTLL6
    Species: Mus musculus [TaxId:10090]
    Gene: Ttll6
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4Q9E8
      • engineered mutation (128-129)
      • engineered mutation (311)
  • Chain 'C':
    Compound: Tubulin polyglutamylase TTLL6
    Species: Mus musculus [TaxId:10090]
    Gene: Ttll6
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4Q9E8
      • engineered mutation (128-129)
      • engineered mutation (311)
  • Chain 'D':
    Compound: Tubulin polyglutamylase TTLL6
    Species: Mus musculus [TaxId:10090]
    Gene: Ttll6
    Database cross-references and differences (RAF-indexed):
    • Uniprot A4Q9E8
      • engineered mutation (128-129)
      • engineered mutation (311)
  • Chain 'F':
    Compound: TTLL6 unregistered chain
    Species: Mus musculus [TaxId:10090]
    Gene: Ttll6
    Database cross-references and differences (RAF-indexed):
    • PDB 6VZR (0-11)
  • Chain 'G':
    Compound: TTLL6 unregistered chain
    Species: Mus musculus [TaxId:10090]
    Gene: Ttll6
    Database cross-references and differences (RAF-indexed):
    • PDB 6VZR (0-10)
  • Heterogens: 2TI, ADP, GOL, MG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vzrA (A:)
gkkkrkkkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksy
qkinhfpgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknkt
yickpdsgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdpl
rvfvyneglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfn
symkthgydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilld
rklkpwllevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflq
qcpnreirleevkgfqamrlqkteeyekkncggfrliypglnlekydkffqdnsslfqnt
vasrarelyarqliqelrqkqekkvflkkarke

    Sequence, based on observed residues (ATOM records):
    >6vzrA (A:)
kkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksyqkinhf
pgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknktyickpd
sgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdplrvfvyn
eglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfnsymkth
gydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilldrklkpw
llevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflqqeirle
evkgfqamrlqkteeyekkncggfrliypglnlekydkff

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vzrB (B:)
gkkkrkkkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksy
qkinhfpgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknkt
yickpdsgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdpl
rvfvyneglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfn
symkthgydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilld
rklkpwllevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflq
qcpnreirleevkgfqamrlqkteeyekkncggfrliypglnlekydkffqdnsslfqnt
vasrarelyarqliqelrqkqekkvflkkarke

    Sequence, based on observed residues (ATOM records):
    >6vzrB (B:)
kkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksyqkinhf
pgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknktyickpd
sgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdplrvfvyn
eglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfnsymkth
gydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilldrklkpw
llevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflqqnreir
leevkgfqamrlqkteeyekkncggfrliypglnlekydkff

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6vzrC (C:)
gkkkrkkkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksy
qkinhfpgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknkt
yickpdsgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdpl
rvfvyneglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfn
symkthgydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilld
rklkpwllevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflq
qcpnreirleevkgfqamrlqkteeyekkncggfrliypglnlekydkffqdnsslfqnt
vasrarelyarqliqelrqkqekkvflkkarke

    Sequence, based on observed residues (ATOM records):
    >6vzrC (C:)
kkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksyqkinhf
pgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknktyickpd
sgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdplrvfvyn
eglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfnsymkth
gydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilldrklkpw
llevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflqqcpnre
irleevkgfqamrlqkteeyekkncggfrliypglnlekydkff

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6vzrD (D:)
gkkkrkkkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksy
qkinhfpgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknkt
yickpdsgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdpl
rvfvyneglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfn
symkthgydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilld
rklkpwllevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflq
qcpnreirleevkgfqamrlqkteeyekkncggfrliypglnlekydkffqdnsslfqnt
vasrarelyarqliqelrqkqekkvflkkarke

    Sequence, based on observed residues (ATOM records):
    >6vzrD (D:)
kkrlvinlsncrydsvrraaqqyglreagdnddwtlywtdysvslervmemksyqkinhf
pgmseicrkdllarnmsrmlklfpkdfhffprtwclpadwgdlqtysrtrknktyickpd
sgargrgifitrsvkeikpgedmicqlyiskpfiidgfkfdlrvyvlvtscdplrvfvyn
eglarfattsyshpnldnldeicmhltnysinkhssnfvqdafsgskrklstfnsymkth
gydveqiwrgiedviiktlisahpvikhnyhtcfpshtlnsacfeilgfdilldrklkpw
llevnispsfstdskldkevkdsllydalvlinlgncdkkkvleeerqrgrflqqcpnre
irleevkgfqamrlqkteeyekkncggfrliypglnlekydkff

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6vzrF (F:)
xxxxxxxxxxxx

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6vzrG (G:)
xxxxxxxxxxx