PDB entry 6vy0

View 6vy0 on RCSB PDB site
Description: sthk p300a cyclic nucleotide-gated potassium channel in a putative active state, in complex with camp
Deposited on 2020-02-25, released 2020-11-11
The last revision was dated 2021-01-13, with a file datestamp of 2021-01-08.
Experiment type: EM
Resolution: 6.68 Å
R-factor: N/A
AEROSPACI score: -0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SthK
    Species: Spirochaeta thermophila DSM 6578 [TaxId:869211]
    Gene: Spith_0644
    Database cross-references and differences (RAF-indexed):
    • Uniprot G0GA88
      • engineered mutation (318)
  • Chain 'B':
    Compound: SthK
    Species: Spirochaeta thermophila DSM 6578 [TaxId:869211]
    Gene: Spith_0644
    Database cross-references and differences (RAF-indexed):
    • Uniprot G0GA88
      • engineered mutation (318)
  • Chain 'C':
    Compound: SthK
    Species: Spirochaeta thermophila DSM 6578 [TaxId:869211]
    Gene: Spith_0644
    Database cross-references and differences (RAF-indexed):
    • Uniprot G0GA88
      • engineered mutation (318)
  • Chain 'D':
    Compound: SthK
    Species: Spirochaeta thermophila DSM 6578 [TaxId:869211]
    Gene: Spith_0644
    Database cross-references and differences (RAF-indexed):
    • Uniprot G0GA88
      • engineered mutation (318)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vy0A (A:)
makdiginsdpnsssvdklmkssgvsnptytlvwkvwilavtlyyairipltlvfpslfs
pllpldilaslaliadipldlafesrrtsgrkptllapsrlpdllaalpldllvfalhlp
splsllslvrllklisvqrsatrilsyrinpallrllslvgfillaahgiacgwmslqpp
senpagtrylsafywtittlttigygditpstptqtvytiviellgaamyglvigniasl
vskldaakllhrervervtaflsykrispelqrriieyfdylwetrrgyeerevlkelph
plrlavameihgdviekvalfkgageefirdiilhlepviygpgeyiiragemgsdvyfi
nrgsvevlsadektryailsegqffgemalilraprtatvrarafcdlyrldketfdril
srypeiaaqiqelavrrkelessglvprgsvkhhhh

    Sequence, based on observed residues (ATOM records):
    >6vy0A (A:)
tytlvwkvwilavtlyyairipltlvfpslfspllpldilaslaliadipldsrlpdlla
alpldllvfalhlpsplsllslvrllklisvqrsatrilsyrinpallrllslvgfilla
ahgiacgwmslqppsenpagtrylsafywtittlttigygditpstptqtvytiviellg
aamyglvigniaslvskldaakllhrervervtaflsykrispelqrriieyfdylwetr
rgyeerevlkelphplrlavameihgdviekvalfkgageefirdiilhlepviygpgey
iiragemgsdvyfinrgsvevlsadektryailsegqffgemalilraprtatvrarafc
dlyrldketfdrilsrypeiaaqiq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vy0B (B:)
makdiginsdpnsssvdklmkssgvsnptytlvwkvwilavtlyyairipltlvfpslfs
pllpldilaslaliadipldlafesrrtsgrkptllapsrlpdllaalpldllvfalhlp
splsllslvrllklisvqrsatrilsyrinpallrllslvgfillaahgiacgwmslqpp
senpagtrylsafywtittlttigygditpstptqtvytiviellgaamyglvigniasl
vskldaakllhrervervtaflsykrispelqrriieyfdylwetrrgyeerevlkelph
plrlavameihgdviekvalfkgageefirdiilhlepviygpgeyiiragemgsdvyfi
nrgsvevlsadektryailsegqffgemalilraprtatvrarafcdlyrldketfdril
srypeiaaqiqelavrrkelessglvprgsvkhhhh

    Sequence, based on observed residues (ATOM records):
    >6vy0B (B:)
tytlvwkvwilavtlyyairipltlvfpslfspllpldilaslaliadipldsrlpdlla
alpldllvfalhlpsplsllslvrllklisvqrsatrilsyrinpallrllslvgfilla
ahgiacgwmslqppsenpagtrylsafywtittlttigygditpstptqtvytiviellg
aamyglvigniaslvskldaakllhrervervtaflsykrispelqrriieyfdylwetr
rgyeerevlkelphplrlavameihgdviekvalfkgageefirdiilhlepviygpgey
iiragemgsdvyfinrgsvevlsadektryailsegqffgemalilraprtatvrarafc
dlyrldketfdrilsrypeiaaqiq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6vy0C (C:)
makdiginsdpnsssvdklmkssgvsnptytlvwkvwilavtlyyairipltlvfpslfs
pllpldilaslaliadipldlafesrrtsgrkptllapsrlpdllaalpldllvfalhlp
splsllslvrllklisvqrsatrilsyrinpallrllslvgfillaahgiacgwmslqpp
senpagtrylsafywtittlttigygditpstptqtvytiviellgaamyglvigniasl
vskldaakllhrervervtaflsykrispelqrriieyfdylwetrrgyeerevlkelph
plrlavameihgdviekvalfkgageefirdiilhlepviygpgeyiiragemgsdvyfi
nrgsvevlsadektryailsegqffgemalilraprtatvrarafcdlyrldketfdril
srypeiaaqiqelavrrkelessglvprgsvkhhhh

    Sequence, based on observed residues (ATOM records):
    >6vy0C (C:)
tytlvwkvwilavtlyyairipltlvfpslfspllpldilaslaliadipldsrlpdlla
alpldllvfalhlpsplsllslvrllklisvqrsatrilsyrinpallrllslvgfilla
ahgiacgwmslqppsenpagtrylsafywtittlttigygditpstptqtvytiviellg
aamyglvigniaslvskldaakllhrervervtaflsykrispelqrriieyfdylwetr
rgyeerevlkelphplrlavameihgdviekvalfkgageefirdiilhlepviygpgey
iiragemgsdvyfinrgsvevlsadektryailsegqffgemalilraprtatvrarafc
dlyrldketfdrilsrypeiaaqiq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6vy0D (D:)
makdiginsdpnsssvdklmkssgvsnptytlvwkvwilavtlyyairipltlvfpslfs
pllpldilaslaliadipldlafesrrtsgrkptllapsrlpdllaalpldllvfalhlp
splsllslvrllklisvqrsatrilsyrinpallrllslvgfillaahgiacgwmslqpp
senpagtrylsafywtittlttigygditpstptqtvytiviellgaamyglvigniasl
vskldaakllhrervervtaflsykrispelqrriieyfdylwetrrgyeerevlkelph
plrlavameihgdviekvalfkgageefirdiilhlepviygpgeyiiragemgsdvyfi
nrgsvevlsadektryailsegqffgemalilraprtatvrarafcdlyrldketfdril
srypeiaaqiqelavrrkelessglvprgsvkhhhh

    Sequence, based on observed residues (ATOM records):
    >6vy0D (D:)
tytlvwkvwilavtlyyairipltlvfpslfspllpldilaslaliadipldsrlpdlla
alpldllvfalhlpsplsllslvrllklisvqrsatrilsyrinpallrllslvgfilla
ahgiacgwmslqppsenpagtrylsafywtittlttigygditpstptqtvytiviellg
aamyglvigniaslvskldaakllhrervervtaflsykrispelqrriieyfdylwetr
rgyeerevlkelphplrlavameihgdviekvalfkgageefirdiilhlepviygpgey
iiragemgsdvyfinrgsvevlsadektryailsegqffgemalilraprtatvrarafc
dlyrldketfdrilsrypeiaaqiq