PDB entry 6vxp

View 6vxp on RCSB PDB site
Description: cryo-em structure of arabidopsis thaliana msl1 in lipid nanodisc
Deposited on 2020-02-22, released 2020-08-05
The last revision was dated 2020-08-12, with a file datestamp of 2020-08-07.
Experiment type: EM
Resolution: 3.39 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Mechanosensitive ion channel protein 1, mitochondrial
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: MSL1, At4g00290, A_IG005I10.9, F5I10.9
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Mechanosensitive ion channel protein 1, mitochondrial
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: MSL1, At4g00290, A_IG005I10.9, F5I10.9
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Mechanosensitive ion channel protein 1, mitochondrial
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: MSL1, At4g00290, A_IG005I10.9, F5I10.9
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Mechanosensitive ion channel protein 1, mitochondrial
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: MSL1, At4g00290, A_IG005I10.9, F5I10.9
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Mechanosensitive ion channel protein 1, mitochondrial
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: MSL1, At4g00290, A_IG005I10.9, F5I10.9
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Mechanosensitive ion channel protein 1, mitochondrial
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: MSL1, At4g00290, A_IG005I10.9, F5I10.9
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Mechanosensitive ion channel protein 1, mitochondrial
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: MSL1, At4g00290, A_IG005I10.9, F5I10.9
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vxpA (A:)
mssksddfgsivasgvtgsgdgngngndwvekakdvlqtsvdavtetakktkdvsdemip
hvqqfldsnpylkdvivpvsltmtgtlfawvvmprilrrfhtyamqssakllpvgfsned
vpyeksfwgaledparylvtfiafaqiaamvapttiaaqyfsptvkgavilslvwflyrw
ktnvitrmlsaksfggldrekvltldkvssvglfaiglmasaeacgvavqsiltvggvgg
vatafaardilgnvlsglsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvl
vpnslfssqvivnksraqwraiaskiplqiddldmipqisneikemlrsntkvflgkeap
hcylsrveksfaeltigcnlirmgkeelyntqqevlleavkiikkhgvslgttwdnstls
nslevlfq

    Sequence, based on observed residues (ATOM records):
    >6vxpA (A:)
ksfwgaledparylvtfiafaqiaamvaqyfsptvkgavilslvwflyrwktnvitrmls
adrekvltldkvssvglfaiglmasaeacgvavqsiltvggvggvatafaardilgnvls
glsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvlvpnslfssqvivnksr
aqwraiaskiplqiddldmipqisneikemlrsntkvflgkeaphcylsrveksfaelti
gcnlirmgkeelyntqqevlleavkiikkhgvslgtt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vxpB (B:)
mssksddfgsivasgvtgsgdgngngndwvekakdvlqtsvdavtetakktkdvsdemip
hvqqfldsnpylkdvivpvsltmtgtlfawvvmprilrrfhtyamqssakllpvgfsned
vpyeksfwgaledparylvtfiafaqiaamvapttiaaqyfsptvkgavilslvwflyrw
ktnvitrmlsaksfggldrekvltldkvssvglfaiglmasaeacgvavqsiltvggvgg
vatafaardilgnvlsglsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvl
vpnslfssqvivnksraqwraiaskiplqiddldmipqisneikemlrsntkvflgkeap
hcylsrveksfaeltigcnlirmgkeelyntqqevlleavkiikkhgvslgttwdnstls
nslevlfq

    Sequence, based on observed residues (ATOM records):
    >6vxpB (B:)
ksfwgaledparylvtfiafaqiaamvaqyfsptvkgavilslvwflyrwktnvitrmls
adrekvltldkvssvglfaiglmasaeacgvavqsiltvggvggvatafaardilgnvls
glsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvlvpnslfssqvivnksr
aqwraiaskiplqiddldmipqisneikemlrsntkvflgkeaphcylsrveksfaelti
gcnlirmgkeelyntqqevlleavkiikkhgvslgtt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6vxpC (C:)
mssksddfgsivasgvtgsgdgngngndwvekakdvlqtsvdavtetakktkdvsdemip
hvqqfldsnpylkdvivpvsltmtgtlfawvvmprilrrfhtyamqssakllpvgfsned
vpyeksfwgaledparylvtfiafaqiaamvapttiaaqyfsptvkgavilslvwflyrw
ktnvitrmlsaksfggldrekvltldkvssvglfaiglmasaeacgvavqsiltvggvgg
vatafaardilgnvlsglsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvl
vpnslfssqvivnksraqwraiaskiplqiddldmipqisneikemlrsntkvflgkeap
hcylsrveksfaeltigcnlirmgkeelyntqqevlleavkiikkhgvslgttwdnstls
nslevlfq

    Sequence, based on observed residues (ATOM records):
    >6vxpC (C:)
ksfwgaledparylvtfiafaqiaamvaqyfsptvkgavilslvwflyrwktnvitrmls
adrekvltldkvssvglfaiglmasaeacgvavqsiltvggvggvatafaardilgnvls
glsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvlvpnslfssqvivnksr
aqwraiaskiplqiddldmipqisneikemlrsntkvflgkeaphcylsrveksfaelti
gcnlirmgkeelyntqqevlleavkiikkhgvslgtt

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6vxpD (D:)
mssksddfgsivasgvtgsgdgngngndwvekakdvlqtsvdavtetakktkdvsdemip
hvqqfldsnpylkdvivpvsltmtgtlfawvvmprilrrfhtyamqssakllpvgfsned
vpyeksfwgaledparylvtfiafaqiaamvapttiaaqyfsptvkgavilslvwflyrw
ktnvitrmlsaksfggldrekvltldkvssvglfaiglmasaeacgvavqsiltvggvgg
vatafaardilgnvlsglsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvl
vpnslfssqvivnksraqwraiaskiplqiddldmipqisneikemlrsntkvflgkeap
hcylsrveksfaeltigcnlirmgkeelyntqqevlleavkiikkhgvslgttwdnstls
nslevlfq

    Sequence, based on observed residues (ATOM records):
    >6vxpD (D:)
ksfwgaledparylvtfiafaqiaamvaqyfsptvkgavilslvwflyrwktnvitrmls
adrekvltldkvssvglfaiglmasaeacgvavqsiltvggvggvatafaardilgnvls
glsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvlvpnslfssqvivnksr
aqwraiaskiplqiddldmipqisneikemlrsntkvflgkeaphcylsrveksfaelti
gcnlirmgkeelyntqqevlleavkiikkhgvslgtt

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6vxpE (E:)
mssksddfgsivasgvtgsgdgngngndwvekakdvlqtsvdavtetakktkdvsdemip
hvqqfldsnpylkdvivpvsltmtgtlfawvvmprilrrfhtyamqssakllpvgfsned
vpyeksfwgaledparylvtfiafaqiaamvapttiaaqyfsptvkgavilslvwflyrw
ktnvitrmlsaksfggldrekvltldkvssvglfaiglmasaeacgvavqsiltvggvgg
vatafaardilgnvlsglsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvl
vpnslfssqvivnksraqwraiaskiplqiddldmipqisneikemlrsntkvflgkeap
hcylsrveksfaeltigcnlirmgkeelyntqqevlleavkiikkhgvslgttwdnstls
nslevlfq

    Sequence, based on observed residues (ATOM records):
    >6vxpE (E:)
ksfwgaledparylvtfiafaqiaamvaqyfsptvkgavilslvwflyrwktnvitrmls
adrekvltldkvssvglfaiglmasaeacgvavqsiltvggvggvatafaardilgnvls
glsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvlvpnslfssqvivnksr
aqwraiaskiplqiddldmipqisneikemlrsntkvflgkeaphcylsrveksfaelti
gcnlirmgkeelyntqqevlleavkiikkhgvslgtt

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6vxpF (F:)
mssksddfgsivasgvtgsgdgngngndwvekakdvlqtsvdavtetakktkdvsdemip
hvqqfldsnpylkdvivpvsltmtgtlfawvvmprilrrfhtyamqssakllpvgfsned
vpyeksfwgaledparylvtfiafaqiaamvapttiaaqyfsptvkgavilslvwflyrw
ktnvitrmlsaksfggldrekvltldkvssvglfaiglmasaeacgvavqsiltvggvgg
vatafaardilgnvlsglsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvl
vpnslfssqvivnksraqwraiaskiplqiddldmipqisneikemlrsntkvflgkeap
hcylsrveksfaeltigcnlirmgkeelyntqqevlleavkiikkhgvslgttwdnstls
nslevlfq

    Sequence, based on observed residues (ATOM records):
    >6vxpF (F:)
ksfwgaledparylvtfiafaqiaamvaqyfsptvkgavilslvwflyrwktnvitrmls
adrekvltldkvssvglfaiglmasaeacgvavqsiltvggvggvatafaardilgnvls
glsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvlvpnslfssqvivnksr
aqwraiaskiplqiddldmipqisneikemlrsntkvflgkeaphcylsrveksfaelti
gcnlirmgkeelyntqqevlleavkiikkhgvslgtt

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6vxpG (G:)
mssksddfgsivasgvtgsgdgngngndwvekakdvlqtsvdavtetakktkdvsdemip
hvqqfldsnpylkdvivpvsltmtgtlfawvvmprilrrfhtyamqssakllpvgfsned
vpyeksfwgaledparylvtfiafaqiaamvapttiaaqyfsptvkgavilslvwflyrw
ktnvitrmlsaksfggldrekvltldkvssvglfaiglmasaeacgvavqsiltvggvgg
vatafaardilgnvlsglsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvl
vpnslfssqvivnksraqwraiaskiplqiddldmipqisneikemlrsntkvflgkeap
hcylsrveksfaeltigcnlirmgkeelyntqqevlleavkiikkhgvslgttwdnstls
nslevlfq

    Sequence, based on observed residues (ATOM records):
    >6vxpG (G:)
ksfwgaledparylvtfiafaqiaamvaqyfsptvkgavilslvwflyrwktnvitrmls
adrekvltldkvssvglfaiglmasaeacgvavqsiltvggvggvatafaardilgnvls
glsmqfsrpfsmgdtikagsvegqviemgltttsllnaekfpvlvpnslfssqvivnksr
aqwraiaskiplqiddldmipqisneikemlrsntkvflgkeaphcylsrveksfaelti
gcnlirmgkeelyntqqevlleavkiikkhgvslgtt