PDB entry 6vwy

View 6vwy on RCSB PDB site
Description: Crystal structure of C45G/T50C D. vulgaris carbon monoxide dehydrogenase (anaerobic)
Class: oxidoreductase
Keywords: nickel-iron-sulfur (Ni-Fe-S) cluster, iron-sulfur (Fe-S) cluster, metalloenzyme, OXIDOREDUCTASE
Deposited on 2020-02-20, released 2020-07-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-24.
Experiment type: XRAY
Resolution: 1.83 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: carbon monoxide dehydrogenase
    Species: Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303) [TaxId:882]
    Gene: cooS, DVU_2098
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q72A99 (Start-628)
      • engineered mutation (44)
      • engineered mutation (49)
    Domains in SCOPe 2.08: d6vwya_
  • Chain 'B':
    Compound: carbon monoxide dehydrogenase
    Species: Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303) [TaxId:882]
    Gene: cooS, DVU_2098
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q72A99
      • engineered mutation (44)
      • engineered mutation (49)
    Domains in SCOPe 2.08: d6vwyb_
  • Heterogens: SF4, XCC, CUV, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6vwyA (A:)
msssktirsrsiwddahamlekakaegistvwdraaeqtpackfgelgtccrncimgpcr
ianrkdgkmrlgvcgadadvivarnfgrfiaggaaghsdhgrdlietleavaegkapgyt
irdvaklrriaaelgvadaatrpahdvaadlvticyndfgsrrnalaflarapqvrrdlw
qrlgmtprgvdreiaemmhrthmgcdndhtsllvhaartaladgwggsmigtelsdilfg
tprprqstvnlgvlrkdavnilvhghnpvvsemilaatrepavrqaaqdagaadinvagl
cctgnellmrqgipmagnhlmtelaivtgaadaivadyqcimpslvqiaacyhtrfvtts
pkgrftgathvevhphnaqercreivmlaidaytrrdparvdipsqpvsimsgfsneail
ealggtpkplidavvagqirgfvgivgcnnpkirqdsanvtltrelirrdimvlatgcvt
taagkagllvpeaaskageglaavcrslgvppvlhmgscvdnsrilqlcallattlgvdi
sdlpvgasspewysekaaaiamyavasgipthlglppnilgsenvtamalhglqdvvgaa
fmvepdpvkaadmleahivarrarlglts

    Sequence, based on observed residues (ATOM records): (download) 
    >6vwyA (A:)
sktirsrsiwddahamlekakaegistvwdraaeqtpackfgelgtccrncimgpcrian
rkdgkmrlgvcgadadvivarnfgrfiaggaaghsdhgrdlietleavaegkapgytird
vaklrriaaelgvadaatrpahdvaadlvticyndfgsrrnalaflarapqvrrdlwqrl
gmtprgvdreiaemmhrthmgcdndhtsllvhaartaladgwggsmigtelsdilfgtpr
prqstvnlgvlrkdavnilvhghnpvvsemilaatrepavrqaaqdagaadinvaglcct
gnellmrqgipmagnhlmtelaivtgaadaivadyqcimpslvqiaacyhtrfvttspkg
rftgathvevhphnaqercreivmlaidaytrrdparvdipsqpvsimsgfsneaileal
ggtpkplidavvagqirgfvgivgcnnpkirqdsanvtltrelirrdimvlatgcvttaa
gkagllvpeaaskageglaavcrslgvppvlhmgscvdnsrilqlcallattlgvdisdl
pvgasspewysekaaaiamyavasgipthlglppnilgsenvtamalhglqdvvgaafmv
epdpvkaadmleahivarrarlglts

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vwyB (B:)
msssktirsrsiwddahamlekakaegistvwdraaeqtpackfgelgtccrncimgpcr
ianrkdgkmrlgvcgadadvivarnfgrfiaggaaghsdhgrdlietleavaegkapgyt
irdvaklrriaaelgvadaatrpahdvaadlvticyndfgsrrnalaflarapqvrrdlw
qrlgmtprgvdreiaemmhrthmgcdndhtsllvhaartaladgwggsmigtelsdilfg
tprprqstvnlgvlrkdavnilvhghnpvvsemilaatrepavrqaaqdagaadinvagl
cctgnellmrqgipmagnhlmtelaivtgaadaivadyqcimpslvqiaacyhtrfvtts
pkgrftgathvevhphnaqercreivmlaidaytrrdparvdipsqpvsimsgfsneail
ealggtpkplidavvagqirgfvgivgcnnpkirqdsanvtltrelirrdimvlatgcvt
taagkagllvpeaaskageglaavcrslgvppvlhmgscvdnsrilqlcallattlgvdi
sdlpvgasspewysekaaaiamyavasgipthlglppnilgsenvtamalhglqdvvgaa
fmvepdpvkaadmleahivarrarlglts

    Sequence, based on observed residues (ATOM records): (download) 
    >6vwyB (B:)
sktirsrsiwddahamlekakaegistvwdraaeqtpackfgelgtccrncimgpcrian
rkdgkmrlgvcgadadvivarnfgrfiaggaaghsdhgrdlietleavaegkapgytird
vaklrriaaelgvadaatrpahdvaadlvticyndfgsrrnalaflarapqvrrdlwqrl
gmtprgvdreiaemmhrthmgcdndhtsllvhaartaladgwggsmigtelsdilfgtpr
prqstvnlgvlrkdavnilvhghnpvvsemilaatrepavrqaaqdagaadinvaglcct
gnellmrqgipmagnhlmtelaivtgaadaivadyqcimpslvqiaacyhtrfvttspkg
rftgathvevhphnaqercreivmlaidaytrrdparvdipsqpvsimsgfsneaileal
ggtpkplidavvagqirgfvgivgcnnpkirqdsanvtltrelirrdimvlatgcvttaa
gkagllvpeaaskageglaavcrslgvppvlhmgscvdnsrilqlcallattlgvdisdl
pvgasspewysekaaaiamyavasgipthlglppnilgsenvtamalhglqdvvgaafmv
epdpvkaadmleahivarrarlglt