PDB entry 6vtl

View 6vtl on RCSB PDB site
Description: structure of an acid-sensing ion channel solubilized by styrene maleic acid and in a resting state at high ph
Deposited on 2020-02-12, released 2020-03-11
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: EM
Resolution: 3.65 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Acid-sensing ion channel 1
    Species: Gallus gallus [TaxId:9031]
    Gene: ASIC1, ACCN2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Acid-sensing ion channel 1
    Species: Gallus gallus [TaxId:9031]
    Gene: ASIC1, ACCN2
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Acid-sensing ion channel 1
    Species: Gallus gallus [TaxId:9031]
    Gene: ASIC1, ACCN2
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vtlA (A:)
mmdlkvdeeevdsgqpvsiqafassstlhgishifsyerlslkrvvwalcfmgslallal
vctnriqyyflyphvtkldevaatrltfpavtfcnlnefrfsrvtkndlyhagellalln
nryeipdtqtadekqleilqdkanfrnfkpkpfnmlefydraghdiremllscffrgeqc
spedfkvvftrygkcytfnagqdgkprlitmkggtgngleimldiqqdeylpvwgetdet
sfeagikvqihsqdepplidqlgfgvapgfqtfvscqeqrliylpppwgdckattgdsef
ydtysitacridcetrylvencncrmvhmpgdapyctpeqykecadpaldflvekdneyc
vcempcnvtrygkelsmvkipskasakylakkynkseqyigenilvldiffealnyetie
qkkayevagllgdiggqmglfigasiltvlelfdyayevikhrlcrrgkcrknhkrnntd
kgvalsmddvkrhnpceslrghpagmtyaanilphhpargtfedftc

    Sequence, based on observed residues (ATOM records):
    >6vtlA (A:)
vsiqafassstlhgishifsyerlslkrvvwalcfmgslallalvctnriqyyflyphvt
kldevaatrltfpavtfcnlnefrfsrvtkndlyhagellallnnryeipdtqtadekql
eilqdkanfrnfkpkpfnmlefydraghdiremllscffrgeqcspedfkvvftrygkcy
tfnagqdgkprlitmkggtgngleimldiqqdeylpvwgetdetsfeagikvqihsqdep
plidqlgfgvapgfqtfvscqeqrliylpppwgdckattgdsefydtysitacridcetr
ylvencncrmvhmpgdapyctpeqykecadpaldflvekdneycvcempcnvtrygkels
mvkipskasakylakkynkseqyigenilvldiffealnyetieqkkayevagllgdigg
qmglfigasiltvlelfdyayevikh

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vtlB (B:)
mmdlkvdeeevdsgqpvsiqafassstlhgishifsyerlslkrvvwalcfmgslallal
vctnriqyyflyphvtkldevaatrltfpavtfcnlnefrfsrvtkndlyhagellalln
nryeipdtqtadekqleilqdkanfrnfkpkpfnmlefydraghdiremllscffrgeqc
spedfkvvftrygkcytfnagqdgkprlitmkggtgngleimldiqqdeylpvwgetdet
sfeagikvqihsqdepplidqlgfgvapgfqtfvscqeqrliylpppwgdckattgdsef
ydtysitacridcetrylvencncrmvhmpgdapyctpeqykecadpaldflvekdneyc
vcempcnvtrygkelsmvkipskasakylakkynkseqyigenilvldiffealnyetie
qkkayevagllgdiggqmglfigasiltvlelfdyayevikhrlcrrgkcrknhkrnntd
kgvalsmddvkrhnpceslrghpagmtyaanilphhpargtfedftc

    Sequence, based on observed residues (ATOM records):
    >6vtlB (B:)
vsiqafassstlhgishifsyerlslkrvvwalcfmgslallalvctnriqyyflyphvt
kldevaatrltfpavtfcnlnefrfsrvtkndlyhagellallnnryeipdtqtadekql
eilqdkanfrnfkpkpfnmlefydraghdiremllscffrgeqcspedfkvvftrygkcy
tfnagqdgkprlitmkggtgngleimldiqqdeylpvwgetdetsfeagikvqihsqdep
plidqlgfgvapgfqtfvscqeqrliylpppwgdckattgdsefydtysitacridcetr
ylvencncrmvhmpgdapyctpeqykecadpaldflvekdneycvcempcnvtrygkels
mvkipskasakylakkynkseqyigenilvldiffealnyetieqkkayevagllgdigg
qmglfigasiltvlelfdyayevikh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6vtlC (C:)
mmdlkvdeeevdsgqpvsiqafassstlhgishifsyerlslkrvvwalcfmgslallal
vctnriqyyflyphvtkldevaatrltfpavtfcnlnefrfsrvtkndlyhagellalln
nryeipdtqtadekqleilqdkanfrnfkpkpfnmlefydraghdiremllscffrgeqc
spedfkvvftrygkcytfnagqdgkprlitmkggtgngleimldiqqdeylpvwgetdet
sfeagikvqihsqdepplidqlgfgvapgfqtfvscqeqrliylpppwgdckattgdsef
ydtysitacridcetrylvencncrmvhmpgdapyctpeqykecadpaldflvekdneyc
vcempcnvtrygkelsmvkipskasakylakkynkseqyigenilvldiffealnyetie
qkkayevagllgdiggqmglfigasiltvlelfdyayevikhrlcrrgkcrknhkrnntd
kgvalsmddvkrhnpceslrghpagmtyaanilphhpargtfedftc

    Sequence, based on observed residues (ATOM records):
    >6vtlC (C:)
vsiqafassstlhgishifsyerlslkrvvwalcfmgslallalvctnriqyyflyphvt
kldevaatrltfpavtfcnlnefrfsrvtkndlyhagellallnnryeipdtqtadekql
eilqdkanfrnfkpkpfnmlefydraghdiremllscffrgeqcspedfkvvftrygkcy
tfnagqdgkprlitmkggtgngleimldiqqdeylpvwgetdetsfeagikvqihsqdep
plidqlgfgvapgfqtfvscqeqrliylpppwgdckattgdsefydtysitacridcetr
ylvencncrmvhmpgdapyctpeqykecadpaldflvekdneycvcempcnvtrygkels
mvkipskasakylakkynkseqyigenilvldiffealnyetieqkkayevagllgdigg
qmglfigasiltvlelfdyayevikh