PDB entry 6vth

View 6vth on RCSB PDB site
Description: p53-specific T cell receptor
Class: immune system
Keywords: TCR complex, MHC, HLA, adoptive cell therapy, IMMUNE SYSTEM
Deposited on 2020-02-12, released 2020-06-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-06-24, with a file datestamp of 2020-06-19.
Experiment type: XRAY
Resolution: 2.36 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: T-cell receptor 12-6, alfa chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VTH
    Domains in SCOPe 2.08: d6vtha1, d6vtha2
  • Chain 'B':
    Compound: TCR 12-6, beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VTH
    Domains in SCOPe 2.08: d6vthb1, d6vthb2
  • Chain 'D':
    Compound: T-cell receptor 12-6, alfa chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VTH
    Domains in SCOPe 2.08: d6vthd1, d6vthd2
  • Chain 'E':
    Compound: TCR 12-6, beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VTH (Start-245)
    Domains in SCOPe 2.08: d6vthe1, d6vthe2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6vthA (A:)
mrkeveqdpgpfnvpegatvafnctysnsasqsffwyrqdcrkepkllmsvyssgnedgr
ftaqlnrasqyisllirdsklsdsatylcvvqpggyqkvtfgtgtklqvipniqnpdpav
yqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnks
dfacanafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records): (download) 
    >6vthA (A:)
keveqdpgpfnvpegatvafnctysnsasqsffwyrqdcrkepkllmsvyssgnedgrft
aqlnrasqyisllirdsklsdsatylcvvqpggyqkvtfgtgtklqvipniqnpdpavyq
lrdsksvclftdfdsqtnvsqkdsdvyitdkcvldmrsmdfksnsavawsnkfacanafn
nsiipedtffps

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vthB (B:)
mnagvtqtpkfqvlktgqsmtlqcaqdmnhnsmywyrqdpgmglrliyysasegttdkge
vpngynvsrlnkrefslrlesaapsqtsvyfcasseglwqvgdeqyfgpgtrltvtedlk
nvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplk
eqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsae
awgrad

    Sequence, based on observed residues (ATOM records): (download) 
    >6vthB (B:)
gvtqtpkfqvlktgqsmtlqcaqdmnhnsmywyrqdpglrliyysasegttdkgevpngy
nvsrlnkrefslrlesaapsqtsvyfcasseglwqvgdeqyfgpgtrltvtedlknvfpp
evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
ndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6vthD (D:)
mrkeveqdpgpfnvpegatvafnctysnsasqsffwyrqdcrkepkllmsvyssgnedgr
ftaqlnrasqyisllirdsklsdsatylcvvqpggyqkvtfgtgtklqvipniqnpdpav
yqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnks
dfacanafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records): (download) 
    >6vthD (D:)
eveqdpgpfnvpegatvafnctysnsasqsffwyrqdcrkepkllmsvyssgnedgrfta
qlnrasqyisllirdsklsdsatylcvvqpggyqkvtfgtgtklqvipniqnpdpavyql
rdssvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfacanaf
nnsiipedtffps

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6vthE (E:)
mnagvtqtpkfqvlktgqsmtlqcaqdmnhnsmywyrqdpgmglrliyysasegttdkge
vpngynvsrlnkrefslrlesaapsqtsvyfcasseglwqvgdeqyfgpgtrltvtedlk
nvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplk
eqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsae
awgrad

    Sequence, based on observed residues (ATOM records): (download) 
    >6vthE (E:)
gvtqtpkfqvlktgqsmtlqcaqdmnhnsmywyrqdpgglrliyysasegttdkgevpng
ynvsrlnkrefslrlesaapsqtsvyfcasseglwqvgdeqyfgpgtrltvtedlknvfp
pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
lndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
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