PDB entry 6vsz

View 6vsz on RCSB PDB site
Description: Crystal structure of a human afucosylated IgG1 Fc expressed in tobacco plants (Nicotiana rustica)
Class: immune system
Keywords: immune system, immunoglobulin, crystallizable fragment, IgG1, Fc
Deposited on 2020-02-12, released 2021-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-17, with a file datestamp of 2021-02-12.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Immunoglobulin gamma-1 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vsza1, d6vsza2
  • Chain 'B':
    Compound: Immunoglobulin gamma-1 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vszb1, d6vszb2
  • Heterogens: BMA, GAL, MAN, NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6vszA (A:)
llggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnaktkpre
eqynstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvytlpp
srdeltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsfflyskltvd
ksrwqqgnvfscsvmhealhnhytqkslsls

    Sequence, based on observed residues (ATOM records): (download) 
    >6vszA (A:)
ggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnaktkpreeq
ynstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvytlppsr
deltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsfflyskltvdks
rwqqgnvfscsvmhealhnhytqkslsl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vszB (B:)
llggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnaktkpre
eqynstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvytlpp
srdeltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsfflyskltvd
ksrwqqgnvfscsvmhealhnhytqkslsls

    Sequence, based on observed residues (ATOM records): (download) 
    >6vszB (B:)
ggpsvflfppkpkdtlmisrtpevtcvvvdvshedpevkfnwyvdgvevhnaktkpreeq
ynstyrvvsvltvlhqdwlngkeykckvsnkalpapiektiskakgqprepqvytlppsr
deltknqvsltclvkgfypsdiavewesngqpennykttppvldsdgsfflyskltvdks
rwqqgnvfscsvmhealhnhytqkslsl