PDB entry 6vry

View 6vry on RCSB PDB site
Description: structure of nci09 fab in complex with siv v2 peptide
Deposited on 2020-02-10, released 2020-12-30
The last revision was dated 2020-12-30, with a file datestamp of 2020-12-25.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'G':
    Compound: SIV V2 peptide
    Species: Simian immunodeficiency virus, synthetic [TaxId:11723]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08810 (Start-14)
      • expression tag (15)
  • Chain 'H':
    Compound: NCI09 heavy chain
    Species: Macaca mulatta [TaxId:9544]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VRY (0-End)
  • Chain 'L':
    Compound: NCI09 light chain
    Species: Macaca mulatta [TaxId:9544]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VRY (0-213)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6vryG (G:)
kftmtglkrdktkeyn

    Sequence, based on observed residues (ATOM records):
    >6vryG (G:)
glkrdktkeyn

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6vryH (H:)
qvqlqesgpglvkpsetlsltcavsggsisdyyywnwirqfpgkglewigniygksasty
ynpslksrvsiskdtsknqfflklssvtaadtavyycareycigstcypildswgqgavv
tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkglevlfq

    Sequence, based on observed residues (ATOM records):
    >6vryH (H:)
qvqlqesgpglvkpsetlsltcavsggsisdyyywnwirqfpgkglewigniygksasty
ynpslksrvsiskdtsknqfflklssvtaadtavyycareycigstcypildswgqgavv
tvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpav
lqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >6vryL (L:)
eivmtqspvtlslspgeratlscrasqsvnaslawyqqkpgqaprlliydastratglpd
rfsgsgsgteftlsisslepedfavyycqhyfnwpltfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec