PDB entry 6vrt

View 6vrt on RCSB PDB site
Description: LT1009 humanized antibody Fab fragment in complex with calcium
Class: immune system
Keywords: antibody, fab, calcium, S1P, IMMUNE SYSTEM
Deposited on 2020-02-09, released 2020-04-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-04-29, with a file datestamp of 2020-04-24.
Experiment type: XRAY
Resolution: 2.56 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Sonepcizumab antibody Fab fragment, heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VRT (0-224)
    Domains in SCOPe 2.08: d6vrth_
  • Chain 'L':
    Compound: Sonepcizumab antibody Fab fragment, light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VRT (0-213)
    Domains in SCOPe 2.08: d6vrtl1, d6vrtl2
  • Heterogens: SO4, CA, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vrtH (H:)
evqlvqsgaevkkpgeslkiscqsfgyifidhtihwmrqmpgqglewmgaisprhditky
nemfrgqvtisadkssstaylqwsslkasdtamyfcarggfygstiwfdfwgqgtmvtvs
sastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqs
sglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscd

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vrtL (L:)
ettvtqspsflsasvgdrvtitcitttdidddmnwfqqepgkapkllisegnilrpgvps
rfsssgygtdftltisklqpedfatyyclqsdnlpftfgqgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec