PDB entry 6vr4

View 6vr4 on RCSB PDB site
Description: virion-packaged dna-dependent rna polymerase of crass-like phage phi14:2
Deposited on 2020-02-06, released 2020-07-29
The last revision was dated 2021-01-20, with a file datestamp of 2021-01-15.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA-dependent RNA polymerase
    Species: Cellulophaga phage phi14:2 [TaxId:1327990]
    Gene: Phi14:2_gp077
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA-dependent RNA polymerase
    Species: Cellulophaga phage phi14:2 [TaxId:1327990]
    Gene: Phi14:2_gp077
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CL, NA

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vr4A (A:)
    mgsshhhhhhsqdpmackienikykgkevesklgsqlidifndldrakeeydklsspefi
    akfgdwindevernvnedgeplliqdvrqdsskhyffilkngerfdlltrefdsftspdl
    tneikeitdqlsyyiynkhfssdfeqvegaklniqneisqfvkegkapvqaaynklqdpd
    ikdlldyydniekhsdefeseivkffsekkliikdaeledvtqeglneglqggdlvqafe
    knskdnatanvklmlsflpkidnltgepalgdylnkpvfrsfdsihsellevlsdittlh
    vqgevldvfssmynkikeladfkksfkplleildtideqkktefvqafylskinfyttti
    etletedqnntlttfkvqnvsnannpissklteyytnfkykilpggklnkgklkdlqstv
    tsllektrkennpkyksdsdfyevfeegvvelmqvfedlgvdsitfeamdiflkqfrfdl
    pennaykimyqqyqgkltnlnnllkdiqsnkinpykinpfknysnlifnslaeaenyfie
    nnnestifsngktywnfarpsyisnrintfknnpgvlrqllntsygqsslwakhllgeek
    nvtgdfvlagnaresasenrlkslelsifnslqekdkgaegndngsisivdqladklnkv
    lrggtkngtsiystvtpgdkstlheikidhfipetissfsngtmifndkivnaftdhfvs
    evnrmkeayqeletlpeskrvvhyhtdargnvmkdgklagnafksghilselsfdqitqd
    dnemlklynedgspinpkgavsneqkilikqtinkvlnqrikeniryfkdqglvidtvnk
    dgnkgfhfhgldksimseytddiqltefdishvvsdftlnsilasieytklftgdpanyk
    nmvdffkrvpatytngtnlrlgleandhlfdvavlenivkpsaylkeigeslklsdlsea
    ekkyileayedvnqtdaqawitpkrwaflisrtgkwnskyqsvynkilksesldasemkl
    aaqplkgvyfglvnntptylkysqavllpqlvagtqlqsladamnkqdigesivldgvkv
    gattpnivtdengdilksislnpltlsnadwklqqdlpvktikptllgsqiqkniysslt
    deatytieneafngsgmfqaindtvsamsnlsiaglsselgkdsegkidkrklydmlere
    mldkgsainllksiqknlpieampgikdklynivfskinsaavklktnggsfiqlsnfgl
    dkqtadakgitwlvepsdlkppviekdadgknyirpgqifmshvqiaklvpdyakmdskt
    lssmidpkalraigyripnqgqssndplqivgilpeamgdtivayteiptktgsdfdidk
    myvmlpnfkvehtkksfklakdyiaqneitveemydeledhgfniddiangeevtesait
    eafiknhilnsnseleyhndfvkqhnidavnkidflgyseelhknkseqlqnrlfdlywa
    vltnektygdlitpidfphvkdeikrvfgdnskqtgenlkfhdplyqlklkftyaggksg
    vgitanmlvdhnrskgidmqfnqynlgvghtqngntvfdkeyseelngtrfkikdtisaf
    lnafvdnakdpyindgnfntytssvafmliragvhpdwiisfigqpvlreladftqryes
    kiipkedvgkssfdiivekyetinqesykdaesrafsldtlqesievgvhgidldvlktf
    kgfqeqakrlnesvqlsrfdtngsgknildliilknkiknlyvseqtqqkgsmmnhfkky
    hnngkitslgtqvkntllftddilnnnpslfllgskpiqdlvnsisnnlvdsrggsrgll
    tnedvgklfykevykyimadfapfkvgdpmayikdtifdlvnyktedkqydssnffienm
    tvyensfgitnknksvdfqdrlyrsaydlmmenpelankmfissflmngfenklidikey
    ipyqwflendirsfieskntglkdsseslrsfeeqfiknnsdsnilapkvsqsviksikg
    ikskhvfelpindktkryilgatetkeevlpnyvkvgsdlyrlkayreksgvyvrtnklg
    fedpksflsikeykfgtrtggnftgeltkqelvytnqwvnenitlangyisadsrtvdnp
    adkileqnslenilfsqnnvvssdenditkqeck
    

    Sequence, based on observed residues (ATOM records):
    >6vr4A (A:)
    ackienikykgkevesklgsqlidifndldrakeeydklsspefiakfgdwindevernv
    nedgeplliqdvrqdsskhyffilkngerfdlltrefdsftspdltneikeitdqlsyyi
    ynkhfssdfeqvegaklniqneisqfvkegkapvqaaynklqdpdikdlldyydniekhs
    defeseivkffsekkliikdaeledvtqeglneglqggdlvqafeknskdnatanvklml
    sflpkidnltgepalgdylnkpvfrsfdsihsellevlsdittlhvqgevldvfssmynk
    ikeladfkksfkplleildtideqkktefvqafylskinfytttietletedqnntlttf
    kvqnvsnannpissklteyytnfkykilpggklnkgklkdlqstvtsllektrkennpky
    ksdsdfyevfeegvvelmqvfedlgvdsitfeamdiflkqfrfdlpennaykimyqqyqg
    kltnlnnllkdiqsnkinpykinpfknysnlifnslaeaenyfiennnestifsngktyw
    nfarpsyisnrintfknnpgvlrqllntsygqsslwakhllgeeknvtgdfvlagnares
    asenrlkslelsifnslqekdkgaegndngsisivdqladklnkvlrggtkngtsiystv
    tpgdkstlheikidhfipetissfsngtmifndkivnaftdhfvsevnrmkeayqeletl
    peskrvvhyhtdargnvmkdgklagnafksghilselsfdqitqddnemlklynedgspi
    npkgavsneqkilikqtinkvlnqrikeniryfkdqglvidtvnkdgnkgfhfhgldksi
    mseytddiqltefdishvvsdftlnsilasieytklftgdpanyknmvdffkrvpatytn
    gtnlrlgleandhlfdvavlenivkpsaylkeigeslklsdlseaekkyileayedvnqt
    daqawitpkrwaflisrtgkwnskyqsvynkilksesldasemklaaqplkgvyfglvnn
    tptylkysqavllpqlvagtqlqsladamnkqdigesivldgvkvgattpnivtdengdi
    lksislnpltlsnadwklqqdlpvktikptllgsqiqkniyssltdeatytieneafngs
    gmfqaindtvsamsnlsiaglsselgkdsegkidkrklydmleremldkgsainllksiq
    knlpieampgikdklynivfskinsaavklktnggsfiqlsnfgldkqtadakgitwlve
    psdlkppviekdadgknyirpgqifmshvqiaklvpdyakmdsktlssmidpkalraigy
    ripnqgqssndplqivgilpeamgdtivayteiptktgsdfdidkmyvmlpnfkvehtkk
    sfklakdyiaqneitveemydeledhgfniddiangeevtesaiteafiknhilnsnsel
    eyhndfvkqhnidavnkidflgyseelhknkseqlqnrlfdlywavltnektygdlitpi
    dfphvkdeikrvfgdnskqtgenlkfhdplyqlklkftyaggksgvgitanmlvdhnrsk
    gidmqfnqynlgvghtqngntvfdkeyseelngtrfkikdtisaflnafvdnakdpyind
    gnfntytssvafmliragvhpdwiisfigqpvlreladftqryeskiipkedvgkssfdi
    ivekyetinqesykdaesrafsldtlqesievgvhgidldvlktfkgfqeqakrlnesvq
    lsrfdtngsgknildliilknkiknlyvseqtqqkgsmmnhfkkyhnngkitslgtqvkn
    tllftddilnnnpslfllgskpiqdlvnsisnnlvdsrggsrglltnedvgklfykevyk
    yimadfapfkvgdpmayikdtifdlvnyktedkqydssnffienmtvyensfgitnknks
    vdfqdrlyrsaydlmmenpelankmfissflmngfenklidikeyipyqwflendirsfi
    eskntglkdsseslrsfeeqfiknnsdsnilapkvsqsviksikgikskhvfelpindkt
    kryilgatetkeevlpnyvkvgsdlyrlkayreksgvyvrtnklgfedpksflsikeykf
    gtrtggnftgeltkqelvytnqwvnenitlangyisadsrtvdnpadkileqnslenilf
    sqnnvv
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vr4B (B:)
    mgsshhhhhhsqdpmackienikykgkevesklgsqlidifndldrakeeydklsspefi
    akfgdwindevernvnedgeplliqdvrqdsskhyffilkngerfdlltrefdsftspdl
    tneikeitdqlsyyiynkhfssdfeqvegaklniqneisqfvkegkapvqaaynklqdpd
    ikdlldyydniekhsdefeseivkffsekkliikdaeledvtqeglneglqggdlvqafe
    knskdnatanvklmlsflpkidnltgepalgdylnkpvfrsfdsihsellevlsdittlh
    vqgevldvfssmynkikeladfkksfkplleildtideqkktefvqafylskinfyttti
    etletedqnntlttfkvqnvsnannpissklteyytnfkykilpggklnkgklkdlqstv
    tsllektrkennpkyksdsdfyevfeegvvelmqvfedlgvdsitfeamdiflkqfrfdl
    pennaykimyqqyqgkltnlnnllkdiqsnkinpykinpfknysnlifnslaeaenyfie
    nnnestifsngktywnfarpsyisnrintfknnpgvlrqllntsygqsslwakhllgeek
    nvtgdfvlagnaresasenrlkslelsifnslqekdkgaegndngsisivdqladklnkv
    lrggtkngtsiystvtpgdkstlheikidhfipetissfsngtmifndkivnaftdhfvs
    evnrmkeayqeletlpeskrvvhyhtdargnvmkdgklagnafksghilselsfdqitqd
    dnemlklynedgspinpkgavsneqkilikqtinkvlnqrikeniryfkdqglvidtvnk
    dgnkgfhfhgldksimseytddiqltefdishvvsdftlnsilasieytklftgdpanyk
    nmvdffkrvpatytngtnlrlgleandhlfdvavlenivkpsaylkeigeslklsdlsea
    ekkyileayedvnqtdaqawitpkrwaflisrtgkwnskyqsvynkilksesldasemkl
    aaqplkgvyfglvnntptylkysqavllpqlvagtqlqsladamnkqdigesivldgvkv
    gattpnivtdengdilksislnpltlsnadwklqqdlpvktikptllgsqiqkniysslt
    deatytieneafngsgmfqaindtvsamsnlsiaglsselgkdsegkidkrklydmlere
    mldkgsainllksiqknlpieampgikdklynivfskinsaavklktnggsfiqlsnfgl
    dkqtadakgitwlvepsdlkppviekdadgknyirpgqifmshvqiaklvpdyakmdskt
    lssmidpkalraigyripnqgqssndplqivgilpeamgdtivayteiptktgsdfdidk
    myvmlpnfkvehtkksfklakdyiaqneitveemydeledhgfniddiangeevtesait
    eafiknhilnsnseleyhndfvkqhnidavnkidflgyseelhknkseqlqnrlfdlywa
    vltnektygdlitpidfphvkdeikrvfgdnskqtgenlkfhdplyqlklkftyaggksg
    vgitanmlvdhnrskgidmqfnqynlgvghtqngntvfdkeyseelngtrfkikdtisaf
    lnafvdnakdpyindgnfntytssvafmliragvhpdwiisfigqpvlreladftqryes
    kiipkedvgkssfdiivekyetinqesykdaesrafsldtlqesievgvhgidldvlktf
    kgfqeqakrlnesvqlsrfdtngsgknildliilknkiknlyvseqtqqkgsmmnhfkky
    hnngkitslgtqvkntllftddilnnnpslfllgskpiqdlvnsisnnlvdsrggsrgll
    tnedvgklfykevykyimadfapfkvgdpmayikdtifdlvnyktedkqydssnffienm
    tvyensfgitnknksvdfqdrlyrsaydlmmenpelankmfissflmngfenklidikey
    ipyqwflendirsfieskntglkdsseslrsfeeqfiknnsdsnilapkvsqsviksikg
    ikskhvfelpindktkryilgatetkeevlpnyvkvgsdlyrlkayreksgvyvrtnklg
    fedpksflsikeykfgtrtggnftgeltkqelvytnqwvnenitlangyisadsrtvdnp
    adkileqnslenilfsqnnvvssdenditkqeck
    

    Sequence, based on observed residues (ATOM records):
    >6vr4B (B:)
    ackienikykgkevesklgsqlidifndldrakeeydklsspefiakfgdwindevernv
    nedgeplliqdvrqdsskhyffilkngerfdlltrefdsftspdltneikeitdqlsyyi
    ynkhfssdfeqvegaklniqneisqfvkegkapvqaaynklqdpdikdlldyydniekhs
    defeseivkffsekkliikdaeledvtqeglneglqggdlvqafeknskdnatanvklml
    sflpkidnltgepalgdylnkpvfrsfdsihsellevlsdittlhvqgevldvfssmynk
    ikeladfkksfkplleildtideqkktefvqafylskinfytttietletedqnntlttf
    kvqnvsnannpissklteyytnfkykilpggklnkgklkdlqstvtsllektrkennpky
    ksdsdfyevfeegvvelmqvfedlgvdsitfeamdiflkqfrfdlpennaykimyqqyqg
    kltnlnnllkdiqsnkinpykinpfknysnlifnslaeaenyfiennnestifsngktyw
    nfarpsyisnrintfknnpgvlrqllntsygqsslwakhllgeeknvtgdfvlagnares
    asenrlkslelsifnslqekdkgaegndngsisivdqladklnkvlrggtkngtsiystv
    tpgdkstlheikidhfipetissfsngtmifndkivnaftdhfvsevnrmkeayqeletl
    peskrvvhyhtdargnvmkdgklagnafksghilselsfdqitqddnemlklynedgspi
    npkgavsneqkilikqtinkvlnqrikeniryfkdqglvidtvnkdgnkgfhfhgldksi
    mseytddiqltefdishvvsdftlnsilasieytklftgdpanyknmvdffkrvpatytn
    gtnlrlgleandhlfdvavlenivkpsaylkeigeslklsdlseaekkyileayedvnqt
    daqawitpkrwaflisrtgkwnskyqsvynkilksesldasemklaaqplkgvyfglvnn
    tptylkysqavllpqlvagtqlqsladamnkqdigesivldgvkvgattpnivtdengdi
    lksislnpltlsnadwklqqdlpvktikptllgsqiqkniyssltdeatytieneafngs
    gmfqaindtvsamsnlsiaglsselgkdsegkidkrklydmleremldkgsainllksiq
    knlpieampgikdklynivfskinsaavklktnggsfiqlsnfgldkqtadakgitwlve
    psdlkppviekdadgknyirpgqifmshvqiaklvpdyakmdsktlssmidpkalraigy
    ripnqgqssndplqivgilpeamgdtivayteiptktgsdfdidkmyvmlpnfkvehtkk
    sfklakdyiaqneitveemydeledhgfniddiangeevtesaiteafiknhilnsnsel
    eyhndfvkqhnidavnkidflgyseelhknkseqlqnrlfdlywavltnektygdlitpi
    dfphvkdeikrvfgdnskqtgenlkfhdplyqlklkftyaggksgvgitanmlvdhnrsk
    gidmqfnqynlgvghtqngntvfdkeyseelngtrfkikdtisaflnafvdnakdpyind
    gnfntytssvafmliragvhpdwiisfigqpvlreladftqryeskiipkedvgkssfdi
    ivekyetinqesykdaesrafsldtlqesievgvhgidldvlktfkgfqeqakrlnesvq
    lsrfdtngsgknildliilknkiknlyvseqtqqkgsmmnhfkkyhnngkitslgtqvkn
    tllftddilnnnpslfllgskpiqdlvnsisnnlvdsrggsrglltnedvgklfykevyk
    yimadfapfkvgdpmayikdtifdlvnyktedkqydssnffienmtvyensfgitnknks
    vdfqdrlyrsaydlmmenpelankmfissflmngfenklidikeyipyqwflendirsfi
    eskntglkdsseslrsfeeqfiknnsdsnilapkvsqsviksikgikskhvfelpindkt
    kryilgatetkeevlpnyvkvgsdlyrlkayreksgvyvrtnklgfedpksflsikeykf
    gtrtggnftgeltkqelvytnqwvnenitlangyisadsrtvdnpadkileqnslenilf
    sqnnvv