PDB entry 6vpd

View 6vpd on RCSB PDB site
Description: Crystal structure of Trgpx in apo form
Class: oxidoreductase
Keywords: glutathione peroxidase, OXIDOREDUCTASE
Deposited on 2020-02-03, released 2020-12-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-12-16, with a file datestamp of 2020-12-11.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glutathione peroxidase
    Species: Hypocrea jecorina (strain QM6a) [TaxId:431241]
    Gene: TRIREDRAFT_47136
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vpda_
  • Chain 'B':
    Compound: glutathione peroxidase
    Species: Hypocrea jecorina (strain QM6a) [TaxId:431241]
    Gene: TRIREDRAFT_47136
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vpdb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6vpdA (A:)
mketwwetwwtewsqpkkkrkvmssatsffdfkvpdgadnevdlsqykgkvvlvvntask
cgftyqyknlesvyqaikkeypddfvvlgfpcnqfgsqepgsneeiqnfcsleqkvtfpv
mgkinvngddahplykwlkkekpgllglervkwnfekfligrdgkvigrwasttepekiq
dkiieaikqpap

    Sequence, based on observed residues (ATOM records): (download) 
    >6vpdA (A:)
satsffdfkvpdgadnevdlsqykgkvvlvvntaskcgftyqyknlesvyqaikkeypdd
fvvlgfpcnqfgsqqkvtfpvmgkinvngddahplykwlkkekpgllglervkwnfekfl
igrdgkvigrwasttepekiqdkiieaikqpap

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vpdB (B:)
mketwwetwwtewsqpkkkrkvmssatsffdfkvpdgadnevdlsqykgkvvlvvntask
cgftyqyknlesvyqaikkeypddfvvlgfpcnqfgsqepgsneeiqnfcsleqkvtfpv
mgkinvngddahplykwlkkekpgllglervkwnfekfligrdgkvigrwasttepekiq
dkiieaikqpap

    Sequence, based on observed residues (ATOM records): (download) 
    >6vpdB (B:)
atsffdfkvpdgadnevdlsqykgkvvlvvntaskcgftyqyknlesvyqaikkeypddf
vvlgfpcnqfgkvtfpvmgkinvngddahplykwlkkekpgllglervkwnfekfligrd
gkvigrwasttepekiqdkiieaikqpap