PDB entry 6vo8

View 6vo8 on RCSB PDB site
Description: X-ray structure of the Cj1427 in the presence of NADH and GDP-D-glycero-D-mannoheptose, an essential NAD-dependent dehydrogenase from Campylobacter jejuni
Class: oxidoreductase
Keywords: capsular polysaccharide, oxidoreductase, dehydrogenase, isomerase
Deposited on 2020-01-30, released 2020-03-25
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-04-22, with a file datestamp of 2020-04-17.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative sugar-nucleotide epimerase/dehydratease
    Species: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) [TaxId:192222]
    Gene: Cj1427c
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vo8a_
  • Chain 'B':
    Compound: Putative sugar-nucleotide epimerase/dehydratease
    Species: Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) [TaxId:192222]
    Gene: Cj1427c
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vo8b_
  • Heterogens: NAI, GZ0, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6vo8A (A:)
mskkvlitggagyigsvltpillekgyevcvidnlmfdqisllscfhnknftfingdamd
enlirqevakadiiiplaalvgaplckrnpklakminyeavkmisdfaspsqifiypntn
sgygigekdamcteesplrpiseygidkvhaeqylldkgncvtfrlatvfgisprmrldl
lvndftyrayrdkfivlfeehfrrnyihvrdvvkgfihgienydkmkgqaynmglssanl
tkrqlaetikkyipdfyihsanigedpdkrdylvsntkleatgwkpdntledgikellra
fkmmkvnrfanfnlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6vo8A (A:)
skkvlitggagyigsvltpillekgyevcvidnlmfdqisllscfhnknftfingdamde
nlirqevakadiiiplaalvgaplckrnpklakminyeavkmisdfaspsqifiypntns
gygigekdamcteesplrpiseygidkvhaeqylldkgncvtfrlatvfgisprmrldll
vndftyrayrdkfivlfeehfrrnyihvrdvvkgfihgienydkmkgqaynmglssanlt
krqlaetikkyipdfyihsanigedpdkrdylvsntkleatgwkpdntledgikellraf
kmm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vo8B (B:)
mskkvlitggagyigsvltpillekgyevcvidnlmfdqisllscfhnknftfingdamd
enlirqevakadiiiplaalvgaplckrnpklakminyeavkmisdfaspsqifiypntn
sgygigekdamcteesplrpiseygidkvhaeqylldkgncvtfrlatvfgisprmrldl
lvndftyrayrdkfivlfeehfrrnyihvrdvvkgfihgienydkmkgqaynmglssanl
tkrqlaetikkyipdfyihsanigedpdkrdylvsntkleatgwkpdntledgikellra
fkmmkvnrfanfnlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6vo8B (B:)
skkvlitggagyigsvltpillekgyevcvidnlmfdqisllscfhnknftfingdamde
nlirqevakadiiiplaalvgaplckrnpklakminyeavkmisdfaspsqifiypntns
gygigmcteesplrpiseygidkvhaeqylldkgncvtfrlatvfgisprmrldllvndf
tyrayrdkfivlfeehfrrnyihvrdvvkgfihgienydkmkgqaynmglssanltkrql
aetikkyipdfyihsanigedpdkrdylvsntkleatgwkpdntledgikellrafkmm