PDB entry 6vjm

View 6vjm on RCSB PDB site
Description: human metabotropic gaba(b) receptor in its apo state
Deposited on 2020-01-16, released 2020-06-10
The last revision was dated 2020-08-26, with a file datestamp of 2020-08-21.
Experiment type: EM
Resolution: 3.97 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Gamma-aminobutyric acid type B receptor subunit 1
    Species: Homo sapiens [TaxId:9606]
    Gene: GABBR1, GPRC3A
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Gamma-aminobutyric acid type B receptor subunit 2
    Species: Homo sapiens [TaxId:9606]
    Gene: GABBR2, GPR51, GPRC3B
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vjmA (A:)
    gserravyigalfpmsggwpggqacqpavemaledvnsrrdilpdyelklihhdskcdpg
    qatkylyellyndpikiilmpgcssvstlvaeaarmwnlivlsygssspalsnrqrfptf
    frthpsatlhnptrvklfekwgwkkiatiqqttevftstlddleervkeagieitfrqsf
    fsdpavpvknlkrqdariivglfyetearkvfcevykerlfgkkyvwfligwyadnwfki
    ydpsinctvdemteaveghitteivmlnpantrsisnmtsqefvekltkrlkrhpeetgg
    fqeaplaydaiwalalalnktsggggrsgvrledfnynnqtitdqiyramnsssfegvsg
    hvvfdasgsrmawtlieqlqggsykkigyydstkddlswsktdkwiggsppadqtlvikt
    frflsqklfisvsvlsslgivlavvclsfniynshvryiqnsqpnlnnltavgcslalaa
    vfplgldgyhigrnqfpfvcqarlwllglgfslgygsmftkiwwvhtvftkkeekkewrk
    tlepwklyatvgllvgmdvltlaiwqivdplhrtietfakeepkedidvsilpqlehcss
    rkmntwlgifygykglllllgiflayetksvstekindhravgmaiynvavlclitapvt
    milssqqdaafafaslaivfssyitlvvlfvpkmrrlitrgewqseaqdtmktgsstnnn
    eeeksrllekenrelekiiaekeervselrhqlqsrlevlfq
    

    Sequence, based on observed residues (ATOM records):
    >6vjmA (A:)
    serravyigalfpmsggwpggqacqpavemaledvnsrrdilpdyelklihhdskcdpgq
    atkylyellyndpikiilmpgcssvstlvaeaarmwnlivlsygssspalsnrqrfptff
    rthpsatlhnptrvklfekwgwkkiatiqqttevftstlddleervkeagieitfrqsff
    sdpavpvknlkrqdariivglfyetearkvfcevykerlfgkkyvwfligwyadnwfkiy
    dpsinctvdemteaveghitteivmlnpantrsisnmtsqefvekltkrlkrhpeetggf
    qeaplaydaiwalalalnktsrledfnynnqtitdqiyramnsssfegvsghvvfdasgs
    rmawtlieqlqggsykkigyydstkddlswsktdkwiggsppadqtlviktfrflsqklf
    isvsvlsslgivlavvclsfniynshvryiqnsqpnlnnltavgcslalaavfplgldgy
    higrnqfpfvcqarlwllglgfslgygsmftkiwwvhtvftkkrktlepwklyatvgllv
    gmdvltlaiwqivdplhrtietfakeepkedidvsilpqlehcssrkmntwlgifygykg
    lllllgiflayetksvstekindhravgmaiynvavlclitapvtmilssqqdaafafas
    laivfssyitlvvlfvpkmrrlit
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vjmB (B:)
    gwargaprpppsspplsimglmpltkevakgsigrgvlpavelaieqirnesllrpyfld
    lrlydtecdnakglkafydaikygpnhlmvfggvcpsvtsiiaeslqgwnlvqlsfaatt
    pvladkkkypyffrtvpsdnavnpailkllkhyqwkrvgtltqdvqrfsevrndltgvly
    gedieisdtesfsndpctsvkklkgndvriilgqfdqnmaakvfccayeenmygskyqwi
    ipgwyepswweqvhteanssrclrknllaamegyigvdfeplsskqiktisgktpqqyer
    eynnkrsgvgpskfhgyaydgiwviaktlqrametlhassrhqriqdfnytdhtlgriil
    namnetnffgvtgqvvfrngermgtikftqfqdsrevkvgeynavadtleiindtirfqg
    seppkdktiileqlrkislplysilsaltilgmimasaflffniknrnqklikmsspymn
    nliilggmlsyasiflfgldgsfvsektfetlctvrtwiltvgyttafgamfaktwrvha
    ifknvkmkkkiikdqkllvivggmllidlcilicwqavdplrrtvekysmepdpagrdis
    irpllehcenthmtiwlgivyaykgllmlfgcflawetrnvsipalndskyigmsvynvg
    imciigaavsfltrdqpnvqfcivalviifcstitlclvfvpklitlrtnpdaatqnrrf
    qftqnqkkedsktstsvtsvnqastsrleglqsenhrlrmkiteldkdleevtmqlqdt
    

    Sequence, based on observed residues (ATOM records):
    >6vjmB (B:)
    spplsimglmpltkevakgsigrgvlpavelaieqirnesllrpyfldlrlydtecdnak
    glkafydaikygpnhlmvfggvcpsvtsiiaeslqgwnlvqlsfaattpvladkkkypyf
    frtvpsdnavnpailkllkhyqwkrvgtltqdvqrfsevrndltgvlygedieisdtesf
    sndpctsvkklkgndvriilgqfdqnmaakvfccayeenmygskyqwiipgwyepswweq
    srclrknllaamegyigvdfeplsskqiktisgktpqqyereynnkrsgvgpskfhgyay
    dgiwviaktlqrametlhasiqdfnytdhtlgriilnamnetnffgvtgqvvfrngermg
    tikftqfqdsrevkvgeynavadtleiindtirfqgseppkdktiileqlrkislplysi
    lsaltilgmimasaflffniknrnqklikmsspymnnliilggmlsyasiflfgldgsfv
    sektfetlctvrtwiltvgyttafgamfaktwrvhaifknvkmkkkiikdqkllvivggm
    llidlcilicwqavdplrrtvekysmepdpagrdisirpllehcenthmtiwlgivyayk
    gllmlfgcflawetrnvsipalndskyigmsvynvgimciigaavsfltrdqpnvqfciv
    alviifcstitlclvfvpklitlrt