PDB entry 6vip

View 6vip on RCSB PDB site
Description: tudor domain of tumor suppressor p53bp1 with mfp-6008
Class: transcription
Keywords: 53BP1, Tudor, MFP-6008, Structural Genomics, Structural Genomics Consortium, SGC, PROTEIN BINDING, TRANSCRIPTION
Deposited on 2020-01-13, released 2020-02-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-12, with a file datestamp of 2020-02-07.
Experiment type: XRAY
Resolution: 1.36 Å
R-factor: N/A
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TP53-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: TP53BP1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vipa1, d6vipa2
  • Chain 'B':
    Compound: TP53-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: TP53BP1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6vipb1, d6vipb2
  • Heterogens: QXY, UNX, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6vipA (A:)
ggnsfvglrvvakwssngyfysgkitrdvgagkykllfddgyecdvlgkdillcdpipld
tevtalsedeyfsagvvkghrkesgelyysiekegqrkwykrmavilsleqgnrlreqyg
lgpye

    Sequence, based on observed residues (ATOM records): (download) 
    >6vipA (A:)
sfvglrvvakwssngyfysgkitrdvgagkykllfddgyecdvlgkdillcdpipldtev
talsedeyfsagvvkghrkesgelyysiekegqrkwykrmavilsleqgnrlreqyglgp

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vipB (B:)
ggnsfvglrvvakwssngyfysgkitrdvgagkykllfddgyecdvlgkdillcdpipld
tevtalsedeyfsagvvkghrkesgelyysiekegqrkwykrmavilsleqgnrlreqyg
lgpye

    Sequence, based on observed residues (ATOM records): (download) 
    >6vipB (B:)
nsfvglrvvakwssngyfysgkitrdvgagkykllfddgyecdvlgkdillcdpipldte
vtalsedeyfsagvvkghrkesgelyysiekegqrkwykrmavilsleqgnrlreqyglg
p