PDB entry 6vid

View 6vid on RCSB PDB site
Description: The Crystal Structure of Aps Domain-Swapped Trimer Q108K:K40D:T53A:R58L:Q38F:Q4F Variant of HCRBPII
Class: lipid binding protein
Keywords: Domain Swapped Trimer, iLBP, LIPID BINDING PROTEIN
Deposited on 2020-01-12, released 2020-08-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-08-19, with a file datestamp of 2020-08-14.
Experiment type: XRAY
Resolution: 2.89 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Retinol-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP2, CRBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50120 (0-132)
      • engineered mutation (3)
      • engineered mutation (37)
      • engineered mutation (39)
      • engineered mutation (52)
      • engineered mutation (57)
      • engineered mutation (107)
    Domains in SCOPe 2.07: d6vida_
  • Chain 'B':
    Compound: Retinol-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP2, CRBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50120 (0-132)
      • engineered mutation (3)
      • engineered mutation (37)
      • engineered mutation (39)
      • engineered mutation (52)
      • engineered mutation (57)
      • engineered mutation (107)
    Domains in SCOPe 2.07: d6vidb_
  • Chain 'C':
    Compound: Retinol-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP2, CRBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50120 (0-132)
      • engineered mutation (3)
      • engineered mutation (37)
      • engineered mutation (39)
      • engineered mutation (52)
      • engineered mutation (57)
      • engineered mutation (107)
    Domains in SCOPe 2.07: d6vidc_
  • Chain 'D':
    Compound: Retinol-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP2, CRBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50120 (0-132)
      • engineered mutation (3)
      • engineered mutation (37)
      • engineered mutation (39)
      • engineered mutation (52)
      • engineered mutation (57)
      • engineered mutation (107)
    Domains in SCOPe 2.07: d6vidd_
  • Chain 'E':
    Compound: Retinol-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP2, CRBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50120 (0-132)
      • engineered mutation (3)
      • engineered mutation (37)
      • engineered mutation (39)
      • engineered mutation (52)
      • engineered mutation (57)
      • engineered mutation (107)
    Domains in SCOPe 2.07: d6vide_
  • Chain 'F':
    Compound: Retinol-binding protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: RBP2, CRBP2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P50120 (Start-132)
      • engineered mutation (3)
      • engineered mutation (37)
      • engineered mutation (39)
      • engineered mutation (52)
      • engineered mutation (57)
      • engineered mutation (107)
    Domains in SCOPe 2.07: d6vidf_
  • Heterogens: ACT, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vidA (A:)
trdfngtwemesnenfegymkaldidfatrkiavrltftdvidqdgdnfktkatstflny
dvdftvgvefdeytksldnrhvkalvtwegdvlvcvqkgekenrgwkkwiegdklylelt
cgdqvcrqvfkkk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vidB (B:)
trdfngtwemesnenfegymkaldidfatrkiavrltftdvidqdgdnfktkatstflny
dvdftvgvefdeytksldnrhvkalvtwegdvlvcvqkgekenrgwkkwiegdklylelt
cgdqvcrqvfkkk

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vidC (C:)
trdfngtwemesnenfegymkaldidfatrkiavrltftdvidqdgdnfktkatstflny
dvdftvgvefdeytksldnrhvkalvtwegdvlvcvqkgekenrgwkkwiegdklylelt
cgdqvcrqvfkkk

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vidD (D:)
trdfngtwemesnenfegymkaldidfatrkiavrltftdvidqdgdnfktkatstflny
dvdftvgvefdeytksldnrhvkalvtwegdvlvcvqkgekenrgwkkwiegdklylelt
cgdqvcrqvfkkk

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vidE (E:)
trdfngtwemesnenfegymkaldidfatrkiavrltftdvidqdgdnfktkatstflny
dvdftvgvefdeytksldnrhvkalvtwegdvlvcvqkgekenrgwkkwiegdklylelt
cgdqvcrqvfkkk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6vidF (F:)
trdfngtwemesnenfegymkaldidfatrkiavrltftdvidqdgdnfktkatstflny
dvdftvgvefdeytksldnrhvkalvtwegdvlvcvqkgekenrgwkkwiegdklylelt
cgdqvcrqvfkkk

    Sequence, based on observed residues (ATOM records): (download) 
    >6vidF (F:)
dfngtwemesnenfegymkaldidfatrkiavrltftdvidqdgdnfktkatstflnydv
dftvgvefdeytksldnrhvkalvtwegdvlvcvqkgekenrgwkkwiegdklyleltcg
dqvcrqvfkkk