PDB entry 6vi2

View 6vi2 on RCSB PDB site
Description: Structure of the unaligned Fab4
Class: immune system
Keywords: Synthetic fab, large terminase, genome-packaging, crystallization chaperone, IMMUNE SYSTEM
Deposited on 2020-01-11, released 2020-09-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: XRAY
Resolution: 1.15 Å
R-factor: N/A
AEROSPACI score: 0.76 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: FAB4 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VI2 (0-214)
    Domains in SCOPe 2.08: d6vi2a1, d6vi2a2
  • Chain 'B':
    Compound: FAB4 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VI2
    Domains in SCOPe 2.08: d6vi2b_
  • Chain 'C':
    Compound: FAB4 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VI2 (0-214)
    Domains in SCOPe 2.08: d6vi2c1, d6vi2c2
  • Chain 'D':
    Compound: FAB4 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VI2
    Domains in SCOPe 2.08: d6vi2d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vi2A (A:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqsvsymgpltfgqgtkveikrtvaapsvfi
fppsdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslss
tltlskadyekhkvyacevthqglsspvtksfnrg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6vi2B (B:)
eceisevqlvesggglvqpggslrlscaasgfnfyssyihwvrqapgkglewvasispys
gstsyadsvkgrftisadtskntaylqmnslraedtavyycaryswpwvsykpyyglhfs
amdywgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsga
ltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdk
tht

    Sequence, based on observed residues (ATOM records): (download) 
    >6vi2B (B:)
vqlvesggglvqpggslrlscaasgfnfyssyihwvrqapgkglewvasispysgstsya
dsvkgrftisadtskntaylqmnslraedtavyycaryswpwvsykpyyglhfsamdywg
qgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvh
tfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepks

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6vi2C (C:)
sdiqmtqspsslsasvgdrvtitcrasqsvssavawyqqkpgkapklliysasslysgvp
srfsgsrsgtdftltisslqpedfatyycqqsvsymgpltfgqgtkveikrtvaapsvfi
fppsdsqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslss
tltlskadyekhkvyacevthqglsspvtksfnrg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6vi2D (D:)
eceisevqlvesggglvqpggslrlscaasgfnfyssyihwvrqapgkglewvasispys
gstsyadsvkgrftisadtskntaylqmnslraedtavyycaryswpwvsykpyyglhfs
amdywgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsga
ltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdk
tht

    Sequence, based on observed residues (ATOM records): (download) 
    >6vi2D (D:)
isevqlvesggglvqpggslrlscaasgfnfyssyihwvrqapgkglewvasispysgst
syadsvkgrftisadtskntaylqmnslraedtavyycaryswpwvsykpyyglhfsamd
ywgqgtlvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgalts
gvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscd