PDB entry 6vh6
View 6vh6 on RCSB PDB site
Description: Crystal structure of Epstein-Barr Virus Nuclear Antigen-1, EBNA1, bound to fragment
Class: viral protein
Keywords: EBNA1, DNA binding protein, Epstein-Barr Virus, viral protein, viral protein-dna complex
Deposited on
2020-01-09, released
2020-05-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-05-06, with a file datestamp of
2020-05-01.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: N/A
AEROSPACI score: 0.59
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Epstein-Barr nuclear antigen 1
Species: Epstein-Barr virus (strain B95-8) [TaxId:10377]
Gene: EBNA1, BKRF1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6vh6a1, d6vh6a2 - Chain 'B':
Compound: Epstein-Barr nuclear antigen 1
Species: Epstein-Barr virus (strain B95-8) [TaxId:10377]
Gene: EBNA1, BKRF1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6vh6b_ - Heterogens: QX4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6vh6A (A:)
gshmgqggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgta
laipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmt
kpaptcnirvtvcsfddgvdlp
Sequence, based on observed residues (ATOM records): (download)
>6vh6A (A:)
shmgqggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtal
aipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtk
paptcnirvtvcsfddgvdlp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6vh6B (B:)
gshmgqggsnpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgta
laipqcrltplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmt
kpaptcnirvtvcsfddgvdlp
Sequence, based on observed residues (ATOM records): (download)
>6vh6B (B:)
snpkfeniaeglrallarshverttdegtwvagvfvyggsktslynlrrgtalaipqcrl
tplsrlpfgmapgpgpqpgplresivcyfmvflqthifaevlkdaikdlvmtkpaptcni
rvtvcsfddgvdlp