PDB entry 6vg4

View 6vg4 on RCSB PDB site
Description: human protocadherin 10 ectodomain
Deposited on 2020-01-07, released 2020-03-11
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protocadherin-10
    Species: Homo sapiens [TaxId:9606]
    Gene: PCDH10, KIAA1400
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, MAN, TAM, CL, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vg4A (A:)
    sqlhytvqeeqehgtfvgniaedlglditklsargfqtvpnsrtpyldlnletgvlyvne
    kidreqickqspscvlhlevflenplelfqveievldindnppsfpepdltveisesatp
    gtrfplesafdpdvgtnslrdyeitpnsyfsldvqtqgdgnrfaelvlekpldreqqavh
    ryvltavdggggggvgegggggggaglppqqqrtgtalltirvldsndnvpafdqpvytv
    slpensppgtlviqlnatdpdegqngevvysfsshisprarelfglsprtgrlevsgeld
    yeespvyqvyvqakdlgpnavpahckvlvrvldandnapeisfstvkeavsegaapgtvv
    alfsvtdrdseengqvqcellgdvpfrlkssfknyytivteapldreagdsytltvvard
    rgepalstsksiqvqvsdvndnaprfsqpvydvyvtennvpgayiyavsatdrdeganaq
    laysilecqiqgmsvftyvsinsengylyalrsfdyeqlkdfsfqveardagspqalagn
    atvnilivdqndnapaivaplpgrngtparevlprsaepgylltrvaavdaddgenarlt
    ysivrgnemnlfrmdwrtgelrtarrvpakrdpqrpyelvievrdhgqpplsstatlvvq
    lvdhhhhhh
    

    Sequence, based on observed residues (ATOM records):
    >6vg4A (A:)
    sqlhytvqeeqehgtfvgniaedlglditklsargfqtvpnsrtpyldlnletgvlyvne
    kidreqickqspscvlhlevflenplelfqveievldindnppsfpepdltveisesatp
    gtrfplesafdpdvgtnslrdyeitpnsyfsldvqtqgdgnrfaelvlekpldreqqavh
    ryvltavdgggpqqqrtgtalltirvldsndnvpafdqpvytvslpensppgtlviqlna
    tdpdegqngevvysfsshisprarelfglsprtgrlevsgeldyeespvyqvyvqakdlg
    pnavpahckvlvrvldandnapeisfstvkeavsegaapgtvvalfsvtdrdseengqvq
    cellgdvpfrlkssfknyytivteapldreagdsytltvvardrgepalstsksiqvqvs
    dvndnaprfsqpvydvyvtennvpgayiyavsatdrdeganaqlaysilecqiqgmsvft
    yvsinsengylyalrsfdyeqlkdfsfqveardagspqalagnatvnilivdqndnapai
    vaplpgrngtparevlprsaepgylltrvaavdaddgenarltysivrgnemnlfrmdwr
    tgelrtarrvpakrdpqrpyelvievrdhgqpplsstatlvvqlvd