PDB entry 6vfj

View 6vfj on RCSB PDB site
Description: de novo designed icosahedral nanoparticle i53_dn5
Deposited on 2020-01-05, released 2020-08-12
The last revision was dated 2020-08-19, with a file datestamp of 2020-08-14.
Experiment type: EM
Resolution: 5.35 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: I53_dn5A
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VFJ (Start-154)
  • Chain 'B':
    Compound: I53_dn5B
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VFJ

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vfjA (A:)
mgkydgsklrigilharwnaeiilalvlgalkrlqefgvkreniiietvpgsfelpygsk
lfvekqkrlgkpldaiipigvlikgstmhfeyicdstthqlmklnfelgipvifgvltcl
tdeqaearagliegkmhnhgedwgaaavematkfn

    Sequence, based on observed residues (ATOM records):
    >6vfjA (A:)
kydgsklrigilharwnaeiilalvlgalkrlqefgvkreniiietvpgsfelpygsklf
vekqkrlgkpldaiipigvlikgstmhfeyicdstthqlmklnfelgipvifgvltcltd
eqaearagliegkmhnhgedwgaaavematkfn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vfjB (B:)
meeaelayllgelayklgeyriairayrialkrdpnnaeawynlgnayykqgryreaiey
yqkaleldpnnaeawynlgnayyergeyeeaieyyrkalrldpnnadamqnllnakmree
lehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vfjB (B:)
eeaelayllgelayklgeyriairayrialkrdpnnaeawynlgnayykqgryreaieyy
qkaleldpnnaeawynlgnayyergeyeeaieyyrkalrldpnnadamqnllnakmree