PDB entry 6vca

View 6vca on RCSB PDB site
Description: tb38 complex
Deposited on 2019-12-20, released 2020-11-11
The last revision was dated 2021-01-06, with a file datestamp of 2021-01-01.
Experiment type: XRAY
Resolution: 3.73 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5'-nucleotidase, ecto (CD73), isoform CRA_a
    Species: Homo sapiens [TaxId:9606]
    Gene: NT5E, hCG_401111
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 5'-nucleotidase, ecto (CD73), isoform CRA_a
    Species: Homo sapiens [TaxId:9606]
    Gene: NT5E, hCG_401111
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 5'-nucleotidase, ecto (CD73), isoform CRA_a
    Species: Homo sapiens [TaxId:9606]
    Gene: NT5E, hCG_401111
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 5'-nucleotidase, ecto (CD73), isoform CRA_a
    Species: Homo sapiens [TaxId:9606]
    Gene: NT5E, hCG_401111
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: TB38 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Chain 'F':
    Compound: TB38 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Chain 'H':
    Compound: TB38 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Chain 'J':
    Compound: TB38 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Chain 'K':
    Compound: TB38 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Chain 'L':
    Compound: TB38 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Chain 'O':
    Compound: TB38 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Chain 'P':
    Compound: TB38 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6VCA (0-End)
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6vcaA (A:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaA (A:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfs

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6vcaB (B:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaB (B:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfs

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6vcaC (C:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaC (C:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfs

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6vcaD (D:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfshhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaD (D:)
weltilhtndvhsrleqtsedsskcvnasrcmggvarlftkvqqirraepnvllldagdq
yqgtiwftvykgaevahfmnalrydamalgnhefdngvegliepllkeakfpilsanika
kgplasqisglylpykvlpvgdevvgivgytsketpflsnpgtnlvfedeitalqpevdk
lktlnvnkiialghsgfemdkliaqkvrgvdvvvgghsntflytgnppskevpagkypfi
vtsddgrkvpvvqayafgkylgylkiefdergnvisshgnpillnssipedpsikadink
wrikldnystqelgktivyldgssqscrfrecnmgnlicdaminnnlrhademfwnhvsm
cilngggirspidernngtitwenlaavlpfggtfdlvqlkgstlkkafehsvhrygqst
geflqvggihvvydlsrkpgdrvvkldvlctkcrvpsydplkmdevykvilpnflanggd
gfqmikdellrhdsgdqdinvvstyiskmkviypavegrikfs

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6vcaE (E:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkththhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaE (E:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvep

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6vcaF (F:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records):
    >6vcaF (F:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvap

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6vcaH (H:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkththhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaH (H:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6vcaJ (J:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records):
    >6vcaJ (J:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvap

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6vcaK (K:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkththhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaK (K:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6vcaL (L:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records):
    >6vcaL (L:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvap

  • Chain 'O':
    Sequence, based on SEQRES records:
    >6vcaO (O:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvlgqpkaapsvt
lfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaass
ylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records):
    >6vcaO (O:)
qtvvtqepsfsvspggtvtltcglssgsvstsyypnwyqqtpgqaprtliystntrssgv
pdrfsgsilgnkaaltitgaqaddesdyycvlfmgsgiwvfgggtkltvl

  • Chain 'P':
    Sequence, based on SEQRES records:
    >6vcaP (P:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkththhhhhh

    Sequence, based on observed residues (ATOM records):
    >6vcaP (P:)
qvqlvesgggvvqpgrslrlscaasgftfssygmhwvrqapgkglewvavfwydgsnkyy
adsvkgrftisrdnskntlylqmnslsaedtavyycarapnwddafdiwgqgtmvtvss