PDB entry 6v4p

View 6v4p on RCSB PDB site
Description: Structure of the integrin AlphaIIbBeta3-Abciximab complex
Class: Cell Adhesion/Immune System
Keywords: Integrin, Abciximab, BLOOD CLOTTING, Cell Adhesion-Immune System complex
Deposited on 2019-11-28, released 2020-02-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-03-11, with a file datestamp of 2020-03-06.
Experiment type: EM
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: integrin alpha-IIb
    Species: Homo sapiens [TaxId:9606]
    Gene: ITGA2B, GP2B, ITGAB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6v4pa_
  • Chain 'B':
    Compound: integrin beta-3
    Species: Homo sapiens [TaxId:9606]
    Gene: ITGB3, GP3A
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Abciximab, heavy chain
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6V4P (0-End)
  • Chain 'D':
    Compound: Abciximab, light chain
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6V4P (0-213)
  • Heterogens: CA, MG

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6v4pA (A:)
    maralcplqalwllewvllllgpcaappawalnldpvqltfyagpngsqfgfsldfhkds
    hgrvaivvgaprtlgpsqeetggvflcpwraeggqcpsllfdlrdetrnvgsqtlqtfka
    rqglgasvvswsdvivacapwqhwnvlekteeaektpvgscflaqpesgrraeyspcrgn
    tlsriyvendfswdkryceagfssvvtqagelvlgapggyyflgllaqapvadifssyrp
    gillwhvssqslsfdssnpeyfdgywgysvavgefdgdlntteyvvgaptwswtlgavei
    ldsyyqrlhrlrgeqmasyfghsvavtdvngdgrhdllvgaplymesradrklaevgrvy
    lflqprgphalgapsllltgtqlygrfgsaiaplgdldrdgyndiavaapyggpsgrgqv
    lvflgqseglrsrpsqvldspfptgsafgfslrgavdiddngypdlivgayganqvavyr
    aqpvvkasvqllvqdslnpavkscvlpqtktpvscfniqmcvgatghnipqklslnaelq
    ldrqkprqgrrvlllgsqqagttlnldlggkhspichttmaflrdeadfrdklspivlsl
    nvslppteagmapavvlhgdthvqeqtrivldcgeddvcvpqlqltasvtgspllvgadn
    vlelqmdaanegegayeaelavhlpqgahymralsnvegferlicnqkkenetrvvlcel
    gnpmkknaqigiamlvsvgnleeagesvsfqlqirsknsqnpnskivlldvpvraeaqve
    lrgnsfpaslvvaaeegereqnsldswgpkvehtyelhnngpgtvnglhlsihlpgqsqp
    sdllyildiqpqgglqcfpqppvnplkvdwglpipspspihpahhkrdrrqiflpepeqp
    srlqdpvlvscdsapctvvqcdlqemargqramvtvlaflwlpslyqrpldqfvlqshaw
    fnv
    

    Sequence, based on observed residues (ATOM records): (download)
    >6v4pA (A:)
    lnldpvqltfyagpngsqfgfsldfhkdshgrvaivvgaprtlgpsqeetggvflcpwra
    eggqcpsllfdlrdetrnvgsqtlqtfkarqglgasvvswsdvivacapwqhwnvlekte
    eaektpvgscflaqpesgrraeyspcrgntlsriyvendfswdkryceagfssvvtqage
    lvlgapggyyflgllaqapvadifssyrpgillwhvssqslsfdssnpeyfdgywgysva
    vgefdgdlntteyvvgaptwswtlgaveildsyyqrlhrlrgeqmasyfghsvavtdvng
    dgrhdllvgaplymesradrklaevgrvylflqprgphalgapsllltgtqlygrfgsai
    aplgdldrdgyndiavaapyggpsgrgqvlvflgqseglrsrpsqvldspfptgsafgfs
    lrgavdiddngypdlivgayganqvavyraqp
    

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.