PDB entry 6v44

View 6v44 on RCSB PDB site
Description: The crystal structure of hemagglutinin from swine influenza virus A/swine/Missouri/A01727926/2015
Class: viral protein
Keywords: Influenza virus, swine, H4, VIRAL PROTEIN
Deposited on 2019-11-27, released 2020-06-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-06-17, with a file datestamp of 2020-06-12.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus (A/swine/Missouri/A01727926/2015(H4N6)) [TaxId:1792497]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6v44a_
  • Chain 'B':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus (A/swine/Missouri/A01727926/2015(H4N6)) [TaxId:1792497]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6v44b_
  • Chain 'C':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus (A/swine/Missouri/A01727926/2015(H4N6)) [TaxId:1792497]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6v44c_
  • Chain 'D':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus (A/swine/Missouri/A01727926/2015(H4N6)) [TaxId:1792497]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6v44d_
  • Chain 'E':
    Compound: Hemagglutinin HA1 chain
    Species: Influenza A virus (A/swine/Missouri/A01727926/2015(H4N6)) [TaxId:1792497]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6v44e_
  • Chain 'F':
    Compound: Hemagglutinin HA2 chain
    Species: Influenza A virus (A/swine/Missouri/A01727926/2015(H4N6)) [TaxId:1792497]
    Gene: HA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6v44f_
  • Heterogens: NAG, BMA, MAN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6v44A (A:)
adlgsqnytgnpviclghhavpngtmvktltddqievvtaqelvesqhlpelcpsplrlv
dgqtcdivngalgspgcdhlngaewdvfierptavdtcypfdvpdyqslrsilanngkfe
fiaeefqwntvkqngksgackranvndffnrlnwltksdgnayplqnltkvnngdyarly
iwgvhhpstdteqtnlyknnpgrvtvstqtsqtsvvpnigsrpwvrglssrisfywtive
pgdlivfntignliaprghyklnsqkkstilntavpigscvskchtdrgsitttkpfqni
srisigdcpkyvkqgslklatgmrnipekatr

    Sequence, based on observed residues (ATOM records): (download) 
    >6v44A (A:)
ytgnpviclghhavpngtmvktltddqievvtaqelvesqhlpelcpsplrlvdgqtcdi
vngalgspgcdhlngaewdvfierptavdtcypfdvpdyqslrsilanngkfefiaeefq
wntvkqngksgackranvndffnrlnwltksdgnayplqnltkvnngdyarlyiwgvhhp
stdteqtnlyknnpgrvtvstqtsqtsvvpnigsrpwvrglssrisfywtivepgdlivf
ntignliaprghyklnsqkkstilntavpigscvskchtdrgsitttkpfqnisrisigd
cpkyvkqgslklatgmrnip

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6v44B (B:)
glfgaiagfiengwqglidgwygfrhqnaegtgtaadlkstqtaidqingklnrliektn
ekyhqiekefeqvegriqdlekyvedtkidlwsynaellvalenqhtidvtdsemnklfe
rvrrqlrenaedkgngcfeifhqcdnnciesirngtydhdiyrdeainnrfqiqsgrsgr
lvprgs

    Sequence, based on observed residues (ATOM records): (download) 
    >6v44B (B:)
glfgaiagfiengwqglidgwygfrhqnaegtgtaadlkstqtaidqingklnrliektn
ekyhqiekefeqvegriqdlekyvedtkidlwsynaellvalenqhtidvtdsemnklfe
rvrrqlrenaedkgngcfeifhqcdnnciesirngtydhdiyrdeainnrfqi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6v44C (C:)
adlgsqnytgnpviclghhavpngtmvktltddqievvtaqelvesqhlpelcpsplrlv
dgqtcdivngalgspgcdhlngaewdvfierptavdtcypfdvpdyqslrsilanngkfe
fiaeefqwntvkqngksgackranvndffnrlnwltksdgnayplqnltkvnngdyarly
iwgvhhpstdteqtnlyknnpgrvtvstqtsqtsvvpnigsrpwvrglssrisfywtive
pgdlivfntignliaprghyklnsqkkstilntavpigscvskchtdrgsitttkpfqni
srisigdcpkyvkqgslklatgmrnipekatr

    Sequence, based on observed residues (ATOM records): (download) 
    >6v44C (C:)
ytgnpviclghhavpngtmvktltddqievvtaqelvesqhlpelcpsplrlvdgqtcdi
vngalgspgcdhlngaewdvfierptavdtcypfdvpdyqslrsilanngkfefiaeefq
wntvkqngksgackranvndffnrlnwltksdgnayplqnltkvnngdyarlyiwgvhhp
stdteqtnlyknnpgrvtvstqtsqtsvvpnigsrpwvrglssrisfywtivepgdlivf
ntignliaprghyklnsqkkstilntavpigscvskchtdrgsitttkpfqnisrisigd
cpkyvkqgslklatgmrnip

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6v44D (D:)
glfgaiagfiengwqglidgwygfrhqnaegtgtaadlkstqtaidqingklnrliektn
ekyhqiekefeqvegriqdlekyvedtkidlwsynaellvalenqhtidvtdsemnklfe
rvrrqlrenaedkgngcfeifhqcdnnciesirngtydhdiyrdeainnrfqiqsgrsgr
lvprgs

    Sequence, based on observed residues (ATOM records): (download) 
    >6v44D (D:)
glfgaiagfiengwqglidgwygfrhqnaegtgtaadlkstqtaidqingklnrliektn
ekyhqiekefeqvegriqdlekyvedtkidlwsynaellvalenqhtidvtdsemnklfe
rvrrqlrenaedkgngcfeifhqcdnnciesirngtydhdiyrdeainnrfqi

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6v44E (E:)
adlgsqnytgnpviclghhavpngtmvktltddqievvtaqelvesqhlpelcpsplrlv
dgqtcdivngalgspgcdhlngaewdvfierptavdtcypfdvpdyqslrsilanngkfe
fiaeefqwntvkqngksgackranvndffnrlnwltksdgnayplqnltkvnngdyarly
iwgvhhpstdteqtnlyknnpgrvtvstqtsqtsvvpnigsrpwvrglssrisfywtive
pgdlivfntignliaprghyklnsqkkstilntavpigscvskchtdrgsitttkpfqni
srisigdcpkyvkqgslklatgmrnipekatr

    Sequence, based on observed residues (ATOM records): (download) 
    >6v44E (E:)
ytgnpviclghhavpngtmvktltddqievvtaqelvesqhlpelcpsplrlvdgqtcdi
vngalgspgcdhlngaewdvfierptavdtcypfdvpdyqslrsilanngkfefiaeefq
wntvkqngksgackranvndffnrlnwltksdgnayplqnltkvnngdyarlyiwgvhhp
stdteqtnlyknnpgrvtvstqtsqtsvvpnigsrpwvrglssrisfywtivepgdlivf
ntignliaprghyklnsqkkstilntavpigscvskchtdrgsitttkpfqnisrisigd
cpkyvkqgslklatgmrnip

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6v44F (F:)
glfgaiagfiengwqglidgwygfrhqnaegtgtaadlkstqtaidqingklnrliektn
ekyhqiekefeqvegriqdlekyvedtkidlwsynaellvalenqhtidvtdsemnklfe
rvrrqlrenaedkgngcfeifhqcdnnciesirngtydhdiyrdeainnrfqiqsgrsgr
lvprgs

    Sequence, based on observed residues (ATOM records): (download) 
    >6v44F (F:)
glfgaiagfiengwqglidgwygfrhqnaegtgtaadlkstqtaidqingklnrliektn
ekyhqiekefeqvegriqdlekyvedtkidlwsynaellvalenqhtidvtdsemnklfe
rvrrqlrenaedkgngcfeifhqcdnnciesirngtydhdiyrdeainnrfqi