PDB entry 6v42

View 6v42 on RCSB PDB site
Description: crystal structure of the flavin oxygenase with cofactor bound involved in folate catabolism
Deposited on 2019-11-27, released 2020-12-02
The last revision was dated 2020-12-02, with a file datestamp of 2020-11-27.
Experiment type: XRAY
Resolution: 1.45 Å
R-factor: N/A
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: FAD/FMN-containing dehydrogenase
    Species: Hoeflea phototrophica (strain DSM 17068 / NCIMB 14078 / DFL-43) [TaxId:411684]
    Gene: HPDFL43_08194
    Database cross-references and differences (RAF-indexed):
    • Uniprot A9D9D1 (2-End)
      • expression tag (0-1)
  • Chain 'B':
    Compound: FAD/FMN-containing dehydrogenase
    Species: Hoeflea phototrophica (strain DSM 17068 / NCIMB 14078 / DFL-43) [TaxId:411684]
    Gene: HPDFL43_08194
    Database cross-references and differences (RAF-indexed):
    • Uniprot A9D9D1 (2-End)
      • expression tag (0-1)
  • Heterogens: FAD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6v42A (A:)
ghmniealtaeldgiriednekivqqksrdfywyspllkrqldhvtgdlvvspkteaeli
rvlkacyrhevpvtprgtgtgnygqamplsggvvlsladmndireikpgwvicgpgvics
dldkaarahsgqelrmhpstyhtatvggfiaggsggigsinwgglrdfgniirlrvvtme
qepqvleltgedlhkvthaygtngiiteiemplapaydwidamvgfdsfdtaaayanala
rqdgiltklvsvvaapcpfdyfkrhqkflkegqsvvlvmvaaqshdafkafsarsggeii
fdattagdlkglpplfelswnhttlralrvdpawtylqvlypfpnqleltakmdrmfpge
lishlefvrfdgditcfglplvkfttderleeimdlhnangcpifnphrytleeggmkqt
deiqlafkreadpkgllnpgkmiawddpdydfnsgkvwlfkglkqas

    Sequence, based on observed residues (ATOM records):
    >6v42A (A:)
ghmniealtaeldgiriednekivqqksrdfywyspllkrqldhvtgdlvvspkteaeli
rvlkacyrhevpvtprgtgtgnygqamplsggvvlsladmndireikpgwvicgpgvics
dldkaarahsgqelrmhpstyhtatvggfiaggsggigsinwgglrdfgniirlrvvtme
qepqvleltgedlhkvthaygtngiiteiemplapaydwidamvgfdsfdtaaayanala
rqdgiltklvsvvaapcpfdyfkrhqkflkegqsvvlvmvaaqshdafkafsarsggeii
fdattagdlkglpplfelswnhttlralrvdpawtylqvlypfpnqleltakmdrmfpge
lishlefvrfdgditcfglplvkfttderleeimdlhnangcpifnphrytleeggmkqt
deiqlafkreadpkgllnpgkmiawddpdydfnsgkvwlfkglkqa

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6v42B (B:)
ghmniealtaeldgiriednekivqqksrdfywyspllkrqldhvtgdlvvspkteaeli
rvlkacyrhevpvtprgtgtgnygqamplsggvvlsladmndireikpgwvicgpgvics
dldkaarahsgqelrmhpstyhtatvggfiaggsggigsinwgglrdfgniirlrvvtme
qepqvleltgedlhkvthaygtngiiteiemplapaydwidamvgfdsfdtaaayanala
rqdgiltklvsvvaapcpfdyfkrhqkflkegqsvvlvmvaaqshdafkafsarsggeii
fdattagdlkglpplfelswnhttlralrvdpawtylqvlypfpnqleltakmdrmfpge
lishlefvrfdgditcfglplvkfttderleeimdlhnangcpifnphrytleeggmkqt
deiqlafkreadpkgllnpgkmiawddpdydfnsgkvwlfkglkqas

    Sequence, based on observed residues (ATOM records):
    >6v42B (B:)
ghmniealtaeldgiriednekivqqksrdfywyspllkrqldhvtgdlvvspkteaeli
rvlkacyrhevpvtprgtgtgnygqamplsggvvlsladmndireikpgwvicgpgvics
dldkaarahsgqelrmhpstyhtatvggfiaggsggigsinwgglrdfgniirlrvvtme
qepqvleltgedlhkvthaygtngiiteiemplapaydwidamvgfdsfdtaaayanala
rqdgiltklvsvvaapcpfdyfkrhqkflkegqsvvlvmvaaqshdafkafsarsggeii
fdattagdlkglpplfelswnhttlralrvdpawtylqvlypfpnqleltakmdrmfpge
lishlefvrfdgditcfglplvkfttderleeimdlhnangcpifnphrytleeggmkqt
deiqlafkreadpkgllnpgkmiawddpdydfnsgkvwlfkglkqa