PDB entry 6v1v

View 6v1v on RCSB PDB site
Description: vip3b (vip3b_2160) adapted for crystallization
Deposited on 2019-11-21, released 2019-12-18
The last revision was dated 2020-04-08, with a file datestamp of 2020-04-03.
Experiment type: XRAY
Resolution: 3.19 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Vegetative insecticidal protein
    Species: BACILLUS THURINGIENSIS [TaxId:1428]
    Gene: vip3Bc1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A290WPI2 (Start-795)
      • engineered mutation (475)
      • engineered mutation (518-519)
  • Chain 'B':
    Compound: Vegetative insecticidal protein
    Species: BACILLUS THURINGIENSIS [TaxId:1428]
    Gene: vip3Bc1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A290WPI2 (Start-795)
      • engineered mutation (475)
      • engineered mutation (518-519)
  • Chain 'C':
    Compound: Vegetative insecticidal protein
    Species: BACILLUS THURINGIENSIS [TaxId:1428]
    Gene: vip3Bc1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A290WPI2 (Start-795)
      • engineered mutation (475)
      • engineered mutation (515-516)
      • engineered mutation (518-519)
  • Chain 'D':
    Compound: Vegetative insecticidal protein
    Species: BACILLUS THURINGIENSIS [TaxId:1428]
    Gene: vip3Bc1
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A290WPI2 (Start-795)
      • engineered mutation (475)
      • engineered mutation (515-516)
      • engineered mutation (518-519)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6v1vA (A:)
    mgsshhhhhhhqrmiivdnnklnvralpsfidyfngiygfatgikdimgmifktdtggsn
    ltldeilknqnllndisgkldgingdlgdliaqgnlnselakellkisneqnqmlnhvna
    qlnainstlniylpkitsmlnevmkqnhvlslqieflskqlqeisdkldiinlnvlinst
    lteitpayqrikyvnekfdeltstveknpksyqdnvtkevienlneltelaksvtkndmd
    sfefylqtfhdvmtgnnlfgrsalktaselitkenvttrgseigkvynflivltslqaka
    fltltacrkllgltdidytqimnhhidgqkrefrinilptlsnnfsnpsysknrgsdidd
    pivvleaapgyaligfeilndplpilkgyqarlkpnyqvdresmsetiygdihklfcpkq
    leqkyyikdiefpegyvitkivfekrlnqlgyevtanfydpstgsidlnkvkvesssced
    eysiikaetdgiymplgvvsetfltpiygfgltvdaanaaitltgksylreslletdlln
    netyliaspdgyissivenwnitsdntgswrannnnafvdkagssslythkdgefsqfig
    nklkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfqtvtkkfnsgvnpseiyfl
    fknqseyeawgnnfiileiksleflpqmlkpedwipsgnvqmkdggrleilgdgyfkqfi
    klendstyhlrlsvkgtgrvsiideskyllfvnvkdedltrvikntsskgecfialegty
    vensstifsnvsivke
    

    Sequence, based on observed residues (ATOM records):
    >6v1vA (A:)
    dyfngiygfatgikdimgmifktdtgnltldeilknqnllndisgkldgingdlgdliaq
    gnlnselakellkisneqnqmlnhvnaqlnainstlniylpkitsmlnevmkqnhvlslq
    ieflskqlqeisdkldnvlinstlteitpayqrikyvnekfdeltstveknpksyqdnvt
    kevienlneltelaksvtkndmdsfefylqtfhdvmtgnnlfgrsalktaselitkenvt
    trgseigkvynflivltslqakafltltacrkllgltdidytqimnhhidgqkrefrini
    lptlsnnfsnpsysknrgsdiddpivvleaapgyaligfeilndplpilkgyqarlkpny
    qvdresmsetiygdihklfcpkqleqkyyikdiefpegyvitkivfekrlnqlgyevtan
    fydpstgsidlnkvkvessdeysiikaetdgiymplgvvsetfltpiygfgltvdnaait
    ltgksylreslletdllnnetyliaspdgyissivenwnitsdntgswrannnnafvdka
    gssslythkdgefsqfignklkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfq
    tvtkkfnvnpseiyflfknqseyeawgnnfiileiksleflpqmlkpedwipsgnvqmkd
    ggrleilgdgyfkqfiklendstyhlrlsvkgtgrvsiideskyllfvnvkdedltrvik
    ntsskgecfialegtyvensstifsnvsivke
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6v1vB (B:)
    mgsshhhhhhhqrmiivdnnklnvralpsfidyfngiygfatgikdimgmifktdtggsn
    ltldeilknqnllndisgkldgingdlgdliaqgnlnselakellkisneqnqmlnhvna
    qlnainstlniylpkitsmlnevmkqnhvlslqieflskqlqeisdkldiinlnvlinst
    lteitpayqrikyvnekfdeltstveknpksyqdnvtkevienlneltelaksvtkndmd
    sfefylqtfhdvmtgnnlfgrsalktaselitkenvttrgseigkvynflivltslqaka
    fltltacrkllgltdidytqimnhhidgqkrefrinilptlsnnfsnpsysknrgsdidd
    pivvleaapgyaligfeilndplpilkgyqarlkpnyqvdresmsetiygdihklfcpkq
    leqkyyikdiefpegyvitkivfekrlnqlgyevtanfydpstgsidlnkvkvesssced
    eysiikaetdgiymplgvvsetfltpiygfgltvdaanaaitltgksylreslletdlln
    netyliaspdgyissivenwnitsdntgswrannnnafvdkagssslythkdgefsqfig
    nklkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfqtvtkkfnsgvnpseiyfl
    fknqseyeawgnnfiileiksleflpqmlkpedwipsgnvqmkdggrleilgdgyfkqfi
    klendstyhlrlsvkgtgrvsiideskyllfvnvkdedltrvikntsskgecfialegty
    vensstifsnvsivke
    

    Sequence, based on observed residues (ATOM records):
    >6v1vB (B:)
    dyfngiygfatgikdimgmifktdtggnltldeilknqnllndisgkldgingdlgdlia
    qgnlnselakellkisneqnqmlnhvnaqlnainstlniylpkitsmlnevmkqnhvlsl
    qieflskqlqeisdkldnvlinstlteitpayqrikyvnekfdeltstveknpksyqdnv
    tkevienlneltelaksvtkndmdsfefylqtfhdvmtgnnlfgrsalktaselitkenv
    ttrgseigkvynflivltslqakafltltacrkllgltdidytqimnhhidgqkrefrin
    ilptlsnnfsnpsysknrgsdiddpivvleaapgyaligfeilndplpilkgyqarlkpn
    yqvdresmsetiygdihklfcpkqleqkyyikdiefpegyvitkivfekrlnqlgyevta
    nfydpstgsidlnkvkvessdeysiikaetdgiymplgvvsetfltpiygfgltvdnaai
    tltgksylreslletdllnnetyliaspdgyissivenwnitsdntgswrannnnafvdk
    agssslythkdgefsqfilkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfqtv
    tkkfnvnpseiyflfknqseyeawgnnfiileiksleflpqmlkpedwipsgnvqmkdgg
    rleilgdgyfkqfiklendstyhlrlsvkgtgrvsiideskyllfvnvkdedltrviknt
    sskgecfialegtyvensstifsnvsivke
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6v1vC (C:)
    mgsshhhhhhhqrmiivdnnklnvralpsfidyfngiygfatgikdimgmifktdtggsn
    ltldeilknqnllndisgkldgingdlgdliaqgnlnselakellkisneqnqmlnhvna
    qlnainstlniylpkitsmlnevmkqnhvlslqieflskqlqeisdkldiinlnvlinst
    lteitpayqrikyvnekfdeltstveknpksyqdnvtkevienlneltelaksvtkndmd
    sfefylqtfhdvmtgnnlfgrsalktaselitkenvttrgseigkvynflivltslqaka
    fltltacrkllgltdidytqimnhhidgqkrefrinilptlsnnfsnpsysknrgsdidd
    pivvleaapgyaligfeilndplpilkgyqarlkpnyqvdresmsetiygdihklfcpkq
    leqkyyikdiefpegyvitkivfekrlnqlgyevtanfydpstgsidlnkvkvesssced
    eysiikaetdgiymplgvvsetfltpiygfgltvdaanaaitltgksylreslletdlln
    netyliaspdgyissivenwnitsdntgswrannnnafvdkagssslythkdgefsqfig
    nklkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfqtvtkkfnsgvnpseiyfl
    fknqseyeawgnnfiileiksleflpqmlkpedwipsgnvqmkdggrleilgdgyfkqfi
    klendstyhlrlsvkgtgrvsiideskyllfvnvkdedltrvikntsskgecfialegty
    vensstifsnvsivke
    

    Sequence, based on observed residues (ATOM records):
    >6v1vC (C:)
    dyfngiygfatgikdimgmifktdtggsnltldeilknqnllndisgkldgingdlgdli
    aqgnlnselakellkisneqnqmlnhvnaqlnainstlniylpkitsmlnevmkqnhvls
    lqieflskqlqeisdkldlnvlinstlteitpayqrikyvnekfdeltstvlneltelak
    svtkndmdsfefylqtfhdvmtgnnlfgrsalktaselitkenvttrgseigkvynfliv
    ltslqakafltltacrkllgltdidytqimnhhidgqkrefrinilptlsnnfsnpsysk
    nrgsdiddpivvleaapgyaligfeilndplpilkgyqarlkpnyqvdresmsetiygdi
    hklfcpkqleqkyyikdiefpegyvitkivfekrlnqlgyevtanfydpstgsidlnkvk
    vesseysiikaetdgiymplgvvsetfltpiygfgltvdaanaaitltgksylresllet
    dllnnetyliaspdgyissivenwnitsdntgswrannnnafvdkagssslythkdgefs
    qfignklkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfqtvtkkfnsgvnpse
    iyflfknqseyeawgnnfiileiksleflpqmlkpedwipsgnvqmkdggrleilgdgyf
    kqfiklendstyhlrlsvkgtgrvsiideskyllfvnvdedltrvikntsskgecfiale
    gtyvensstifsnvsivke
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6v1vD (D:)
    mgsshhhhhhhqrmiivdnnklnvralpsfidyfngiygfatgikdimgmifktdtggsn
    ltldeilknqnllndisgkldgingdlgdliaqgnlnselakellkisneqnqmlnhvna
    qlnainstlniylpkitsmlnevmkqnhvlslqieflskqlqeisdkldiinlnvlinst
    lteitpayqrikyvnekfdeltstveknpksyqdnvtkevienlneltelaksvtkndmd
    sfefylqtfhdvmtgnnlfgrsalktaselitkenvttrgseigkvynflivltslqaka
    fltltacrkllgltdidytqimnhhidgqkrefrinilptlsnnfsnpsysknrgsdidd
    pivvleaapgyaligfeilndplpilkgyqarlkpnyqvdresmsetiygdihklfcpkq
    leqkyyikdiefpegyvitkivfekrlnqlgyevtanfydpstgsidlnkvkvesssced
    eysiikaetdgiymplgvvsetfltpiygfgltvdaanaaitltgksylreslletdlln
    netyliaspdgyissivenwnitsdntgswrannnnafvdkagssslythkdgefsqfig
    nklkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfqtvtkkfnsgvnpseiyfl
    fknqseyeawgnnfiileiksleflpqmlkpedwipsgnvqmkdggrleilgdgyfkqfi
    klendstyhlrlsvkgtgrvsiideskyllfvnvkdedltrvikntsskgecfialegty
    vensstifsnvsivke
    

    Sequence, based on observed residues (ATOM records):
    >6v1vD (D:)
    dyfngiygfatgikdimgmifktdtggsnltldeilknqnllndisgkldgingdlgdli
    aqgnlnselakellkisneqnqmlnhvnaqlnainstlniylpkitsmlnevmkqnhvls
    lqieflskqlqeisdkldilnvlinstlteitpayqrikyvnekfdeltstvlneltela
    ksvtkndmdsfefylqtfhdvmtgnnlfgrsalktaselitkenvttrgseigkvynfli
    vltslqakafltltacrkllgltdidytqimnhhidgqkrefrinilptlsnnfsnpsys
    knrgsdiddpivvleaapgyaligfeilndplpilkgyqarlkpnyqvdresmsetiygd
    ihklfcpkqleqkyyikdiefpegyvitkivfekrlnqlgyevtanfydpstgsidlnkv
    kvessdeysiikaetdgiymplgvvsetfltpiygfgltvdaanaaitltgksylresll
    etdllnnetyliaspdgyissivenwnitsdntgswrannnnafvdkaslythkdgefsq
    fignklkpktnyviqyvikgrpaiylknnkdtlfedtknnfsdfqtvtkkfnsgvnpsei
    yflfknqseyeannfiileiksleflpqmlkpedwipsgnvqmkdggrleilgdgyfkqf
    iklendstyhlrlsvkgtgrvsiideskyllfvnvkdedltrvikntsskcfialegtys
    tifsnvsivke