PDB entry 6v1a

View 6v1a on RCSB PDB site
Description: immune receptor complex
Deposited on 2019-11-20, released 2020-11-25
The last revision was dated 2021-06-09, with a file datestamp of 2021-06-04.
Experiment type: XRAY
Resolution: 2.29 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hla class II histocompatibility antigen, dr alpha chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DRA, HLA-DRA1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: HLA class II histocompatibility antigen, DRB1-4 beta chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DRB1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Fibrinogen beta 74cit69-81
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6V1A (0-12)
  • Chain 'D':
    Compound: M134 TCR alpha chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6V1A
  • Chain 'E':
    Compound: M134 TCR beta chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6V1A (0-241)
  • Heterogens: CIR, NAG, GOL, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6v1aA (A:)
ikeehviiqaefylnpdqsgefmfdfdgdeifhvdmakketvwrleefgrfasfeaqgal
aniavdkanleimtkrsnytpitnvppevtvltnspvelrepnvlicfidkftppvvnvt
wlrngkpvttgvsetvflpredhlfrkfhylpflpstedvydcrvehwgldepllkhwef
dtsgddddk

    Sequence, based on observed residues (ATOM records):
    >6v1aA (A:)
keehviiqaefylnpdqsgefmfdfdgdeifhvdmakketvwrleefgrfasfeaqgala
niavdkanleimtkrsnytpitnvppevtvltnspvelrepnvlicfidkftppvvnvtw
lrngkpvttgvsetvflpredhlfrkfhylpflpstedvydcrvehwgldepllkhwefd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6v1aB (B:)
gdtrprfleqvkhechffngtervrfldryfyhqeeyvrfdsdvgeyravtelgrpdaey
wnsqkdlleqkraavdtycrhnygvgesftvqrrvypevtvypaktqplqhhnllvcsvn
gfypgsievrwfrngqeektgvvstgliqngdwtfqtlvmletvprsgevytcqvehpsl
tspltvewratggddddk

    Sequence, based on observed residues (ATOM records):
    >6v1aB (B:)
dtrprfleqvkhechffngtervrfldryfyhqeeyvrfdsdvgeyravtelgrpdaeyw
nsqkdlleqkraavdtycrhnygvgesftvqrrvypevtvypaktvcsvngfypgsievr
wfrngqeektgvvstgliqngdwtfqtlvmletevytcqvehpsltspltvew

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6v1aC (C:)
ggyrarpakaaat

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6v1aD (D:)
gdsvtqtegqvtvsesksliinctysatsiaypnlfwyvrypgeglqlllkvitagqkgs
srgfeatynkettsfhlqkasvqesdsavyycalsdsssfsklvfgqgtslsvvpniqnp
dpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavaw
snksdfacanafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records):
    >6v1aD (D:)
dsvtqtegqvtvsesksliinctysatsiaypnlfwyvrypgeglqlllkvitagqkgss
rgfeatynkettsfhlqkasvqesdsavyycalsdsssfsklvfgqgtslsvvpniqnpd
pavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavaws
nksdfacanafnnsiipedtffpsp

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6v1aE (E:)
avfqtpnyhvtqvgnevsfnckqtlghdtmywykqdskkllkimfsynnkqlivnetvpr
rfspqssdkahlnlriksvepedsavylcassldwasqntlyfgagtrlsvledlnkvfp
pevavfepseaeishtqkatlvclatgffpdhvelswwvngkevhsgvctdpqplkeqpa
lndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgr
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