PDB entry 6v0i

View 6v0i on RCSB PDB site
Description: lipophilic envelope-spanning tunnel b (letb), model 7
Deposited on 2019-11-18, released 2020-05-06
The last revision was dated 2020-11-25, with a file datestamp of 2020-11-20.
Experiment type: EM
Resolution: 3.43 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Intermembrane transport protein YebT
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: yebT, b1834, JW1823
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Intermembrane transport protein YebT
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: yebT, b1834, JW1823
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Intermembrane transport protein YebT
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: yebT, b1834, JW1823
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Intermembrane transport protein YebT
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: yebT, b1834, JW1823
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Intermembrane transport protein YebT
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: yebT, b1834, JW1823
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Intermembrane transport protein YebT
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: yebT, b1834, JW1823
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6v0iA (A:)
gntvtidfmsadgivpgrtpvryqgvevgtvqdislsddlrkievkvsiksdmkdalree
tqfwlvtpkaslagvsgldalvggnyigmmpgkgkeqdhfvaldtqpkyrldngdlmihl
qapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgsrfwnvs
gvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqrgviikl
elpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrentrielrn
pklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltltapesygi
dagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdvkvgldg
veflgasasewinggirilpgdkgemkasyplyanlekalenslsdlptttvslsaetlp
dvqagsvvlyrkfevgevitvrpranafdidlhikpeyrnlltsnsvfwaeggakvqlng
sgltvqasplsralkgaisfdnlsgasasqrkgdkrilyasetaaravggqitlhafdag
klavgmpirylgidigqiqtldlitarnevqakavlypeyvqtfarggtrfsvvtpqisa
agvehldtilqpyinvepgrgnprrdfelqeatitdsryldglsiiveapeagslgigtp
vlfrglevgtvtgmtlgtlsdrvmiamriskryqhlvrnnsvfwlasgysldfgltggvv
ktgtfnqfirggiafatppgtplapkaqegkhfllqesepkewrewgtalpk

    Sequence, based on observed residues (ATOM records):
    >6v0iA (A:)
dlmihlqapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgs
rfwnvsgvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqr
gviiklelpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrent
rielrnpklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltlta
pesygidagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdv
kvgldgveflgasasewinggirilpgdkgemkasyplyanlekalensls

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6v0iB (B:)
gntvtidfmsadgivpgrtpvryqgvevgtvqdislsddlrkievkvsiksdmkdalree
tqfwlvtpkaslagvsgldalvggnyigmmpgkgkeqdhfvaldtqpkyrldngdlmihl
qapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgsrfwnvs
gvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqrgviikl
elpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrentrielrn
pklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltltapesygi
dagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdvkvgldg
veflgasasewinggirilpgdkgemkasyplyanlekalenslsdlptttvslsaetlp
dvqagsvvlyrkfevgevitvrpranafdidlhikpeyrnlltsnsvfwaeggakvqlng
sgltvqasplsralkgaisfdnlsgasasqrkgdkrilyasetaaravggqitlhafdag
klavgmpirylgidigqiqtldlitarnevqakavlypeyvqtfarggtrfsvvtpqisa
agvehldtilqpyinvepgrgnprrdfelqeatitdsryldglsiiveapeagslgigtp
vlfrglevgtvtgmtlgtlsdrvmiamriskryqhlvrnnsvfwlasgysldfgltggvv
ktgtfnqfirggiafatppgtplapkaqegkhfllqesepkewrewgtalpk

    Sequence, based on observed residues (ATOM records):
    >6v0iB (B:)
dlmihlqapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgs
rfwnvsgvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqr
gviiklelpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrent
rielrnpklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltlta
pesygidagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdv
kvgldgveflgasasewinggirilpgdkgemkasyplyanlekalensls

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6v0iC (C:)
gntvtidfmsadgivpgrtpvryqgvevgtvqdislsddlrkievkvsiksdmkdalree
tqfwlvtpkaslagvsgldalvggnyigmmpgkgkeqdhfvaldtqpkyrldngdlmihl
qapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgsrfwnvs
gvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqrgviikl
elpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrentrielrn
pklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltltapesygi
dagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdvkvgldg
veflgasasewinggirilpgdkgemkasyplyanlekalenslsdlptttvslsaetlp
dvqagsvvlyrkfevgevitvrpranafdidlhikpeyrnlltsnsvfwaeggakvqlng
sgltvqasplsralkgaisfdnlsgasasqrkgdkrilyasetaaravggqitlhafdag
klavgmpirylgidigqiqtldlitarnevqakavlypeyvqtfarggtrfsvvtpqisa
agvehldtilqpyinvepgrgnprrdfelqeatitdsryldglsiiveapeagslgigtp
vlfrglevgtvtgmtlgtlsdrvmiamriskryqhlvrnnsvfwlasgysldfgltggvv
ktgtfnqfirggiafatppgtplapkaqegkhfllqesepkewrewgtalpk

    Sequence, based on observed residues (ATOM records):
    >6v0iC (C:)
dlmihlqapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgs
rfwnvsgvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqr
gviiklelpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrent
rielrnpklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltlta
pesygidagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdv
kvgldgveflgasasewinggirilpgdkgemkasyplyanlekalensls

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6v0iD (D:)
gntvtidfmsadgivpgrtpvryqgvevgtvqdislsddlrkievkvsiksdmkdalree
tqfwlvtpkaslagvsgldalvggnyigmmpgkgkeqdhfvaldtqpkyrldngdlmihl
qapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgsrfwnvs
gvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqrgviikl
elpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrentrielrn
pklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltltapesygi
dagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdvkvgldg
veflgasasewinggirilpgdkgemkasyplyanlekalenslsdlptttvslsaetlp
dvqagsvvlyrkfevgevitvrpranafdidlhikpeyrnlltsnsvfwaeggakvqlng
sgltvqasplsralkgaisfdnlsgasasqrkgdkrilyasetaaravggqitlhafdag
klavgmpirylgidigqiqtldlitarnevqakavlypeyvqtfarggtrfsvvtpqisa
agvehldtilqpyinvepgrgnprrdfelqeatitdsryldglsiiveapeagslgigtp
vlfrglevgtvtgmtlgtlsdrvmiamriskryqhlvrnnsvfwlasgysldfgltggvv
ktgtfnqfirggiafatppgtplapkaqegkhfllqesepkewrewgtalpk

    Sequence, based on observed residues (ATOM records):
    >6v0iD (D:)
dlmihlqapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgs
rfwnvsgvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqr
gviiklelpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrent
rielrnpklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltlta
pesygidagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdv
kvgldgveflgasasewinggirilpgdkgemkasyplyanlekalensls

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6v0iE (E:)
gntvtidfmsadgivpgrtpvryqgvevgtvqdislsddlrkievkvsiksdmkdalree
tqfwlvtpkaslagvsgldalvggnyigmmpgkgkeqdhfvaldtqpkyrldngdlmihl
qapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgsrfwnvs
gvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqrgviikl
elpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrentrielrn
pklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltltapesygi
dagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdvkvgldg
veflgasasewinggirilpgdkgemkasyplyanlekalenslsdlptttvslsaetlp
dvqagsvvlyrkfevgevitvrpranafdidlhikpeyrnlltsnsvfwaeggakvqlng
sgltvqasplsralkgaisfdnlsgasasqrkgdkrilyasetaaravggqitlhafdag
klavgmpirylgidigqiqtldlitarnevqakavlypeyvqtfarggtrfsvvtpqisa
agvehldtilqpyinvepgrgnprrdfelqeatitdsryldglsiiveapeagslgigtp
vlfrglevgtvtgmtlgtlsdrvmiamriskryqhlvrnnsvfwlasgysldfgltggvv
ktgtfnqfirggiafatppgtplapkaqegkhfllqesepkewrewgtalpk

    Sequence, based on observed residues (ATOM records):
    >6v0iE (E:)
dlmihlqapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgs
rfwnvsgvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqr
gviiklelpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrent
rielrnpklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltlta
pesygidagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdv
kvgldgveflgasasewinggirilpgdkgemkasyplyanlekalensls

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6v0iF (F:)
gntvtidfmsadgivpgrtpvryqgvevgtvqdislsddlrkievkvsiksdmkdalree
tqfwlvtpkaslagvsgldalvggnyigmmpgkgkeqdhfvaldtqpkyrldngdlmihl
qapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgsrfwnvs
gvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqrgviikl
elpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrentrielrn
pklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltltapesygi
dagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdvkvgldg
veflgasasewinggirilpgdkgemkasyplyanlekalenslsdlptttvslsaetlp
dvqagsvvlyrkfevgevitvrpranafdidlhikpeyrnlltsnsvfwaeggakvqlng
sgltvqasplsralkgaisfdnlsgasasqrkgdkrilyasetaaravggqitlhafdag
klavgmpirylgidigqiqtldlitarnevqakavlypeyvqtfarggtrfsvvtpqisa
agvehldtilqpyinvepgrgnprrdfelqeatitdsryldglsiiveapeagslgigtp
vlfrglevgtvtgmtlgtlsdrvmiamriskryqhlvrnnsvfwlasgysldfgltggvv
ktgtfnqfirggiafatppgtplapkaqegkhfllqesepkewrewgtalpk

    Sequence, based on observed residues (ATOM records):
    >6v0iF (F:)
dlmihlqapdlgslnsgslvyfrkipvgkvydyainpnkqgvvidvlierrftdlvkkgs
rfwnvsgvdanvsisgakvkleslaalvngaiafdspeeskpaeaedtfglyedlahsqr
gviiklelpsgagltadstplmyqglevgqltkldlnpggkvtgemtvdpsvvtllrent
rielrnpklslsdanlsalltgktfelvpgdgeprkefvvvpgekallhepdvltltlta
pesygidagqplilhgvqvgqvidrkltskgvtftvaiepqhrelvkgdskfvvnsrvdv
kvgldgveflgasasewinggirilpgdkgemkasyplyanlekalensls