PDB entry 6uzx

View 6uzx on RCSB PDB site
Description: Crystal structure of GLUN1/GLUN2A-4M mutant ligand-binding domain in complex with glycine and UBP791
Class: membrane protein
Keywords: NMDAR, ligand-binding domain, antagonist, MEMBRANE PROTEIN
Deposited on 2019-11-15, released 2020-01-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-05, with a file datestamp of 2020-01-31.
Experiment type: XRAY
Resolution: 2.41 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor ionotropic, NMDA 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Grin1, Nmdar1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35439 (Start-151)
      • linker (152-153)
    • Uniprot P35439 (154-End)
    Domains in SCOPe 2.08: d6uzxa_
  • Chain 'B':
    Compound: Glutamate receptor ionotropic, NMDA 2A
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Grin2a
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q00959 (0-137)
      • engineered mutation (12)
      • linker (138-139)
    • Uniprot Q00959 (140-End)
      • engineered mutation (217)
      • engineered mutation (219-220)
      • conflict (237)
    Domains in SCOPe 2.08: d6uzxb_
  • Heterogens: GLY, QM4, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6uzxA (A:)
    gmstrlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpndtspgsprhtvp
    qccygfcidlliklartmnftyevhlvadgkfgtqervnnsnkkewngmmgellsgqadm
    ivapltinneraqyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqss
    vdiyfrrqvelstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvt
    tgelffrsgfgigmrkdspwkqnvslsilkshengfmedldktwvryqecds
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uzxA (A:)
    trlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpnhtvpqccygfcidll
    iklartmnftyevhlvadgkfgtqervnnkkewngmmgellsgqadmivapltinneraq
    yiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqssvdiyfrrqvelst
    myrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffrsgfgig
    mrkdspwkqnvslsilkshengfmedldktwvryqec
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6uzxB (B:)
    ddnhlsivtleerpfvivedidpltetcvrntvpcrkfvkinnstnegmnvkkcckgfci
    dilkklsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineersev
    vdfsvpfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnypy
    mhqymtrfnqrgvedalvslktgkldafiydaavlnymarkdegcklvtigsgyifattg
    ygialqkgspwkrqidlallqfvgdgemeeletlwltgichn
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uzxB (B:)
    ddnhlsivtleerpfvivedidltetcvrntvpcrkfvkinnstnegmnvkkcckgfcid
    ilkklsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineersevv
    dfsvpfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnypym
    hqymtrfnqrgvedalvslktgkldafiydaavlnymarkdegcklvtigsgyifattgy
    gialqkgspwkrqidlallqfvgdgemeeletlwltgic