PDB entry 6uyz

View 6uyz on RCSB PDB site
Description: Crystal structure of K46-acetylated SUMO1 in complex with phosphorylated DAXX
Class: nuclear protein/protein binding
Keywords: SUMO1, PML, SUMO INTERACTION MOTIF, PHOSPHOSIM, NUCLEAR PROTEIN-PROTEIN BINDING complex
Deposited on 2019-11-14, released 2019-11-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-19, with a file datestamp of 2020-02-14.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Small ubiquitin-related modifier 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SUMO1, SMT3C, SMT3H3, UBL1, OK/SW-cl.43
    Database cross-references and differences (RAF-indexed):
    • Uniprot P63165
      • engineered mutation (37)
    Domains in SCOPe 2.08: d6uyza_
  • Chain 'B':
    Compound: phosphorylated DAXX
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UYZ
  • Chain 'C':
    Compound: Small ubiquitin-related modifier 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SUMO1, SMT3C, SMT3H3, UBL1, OK/SW-cl.43
    Database cross-references and differences (RAF-indexed):
    • Uniprot P63165 (2-End)
      • engineered mutation (37)
    Domains in SCOPe 2.08: d6uyzc_
  • Chain 'D':
    Compound: phosphorylated DAXX
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UYZ
  • Heterogens: ALY, SEP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6uyzA (A:)
gskegeyiklkvigqdsseihfkvkmtthlkklkesyaqrqgvpmnslrflfegqriadn
htpkelgmeeedvievyqeqtgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6uyzA (A:)
eyiklkvigqdsseihfkvkmtthlkklkesyaqrqgvpmnslrflfegqriadnhtpke
lgmeeedvievyqeqtg

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6uyzC (C:)
gskegeyiklkvigqdsseihfkvkmtthlkklkesyaqrqgvpmnslrflfegqriadn
htpkelgmeeedvievyqeqtgg

    Sequence, based on observed residues (ATOM records): (download) 
    >6uyzC (C:)
kegeyiklkvigqdsseihfkvkmtthlkklkesyaqrqgvpmnslrflfegqriadnht
pkelgmeeedvievyqeqt

  • Chain 'D':
    No sequence available.