PDB entry 6uta

View 6uta on RCSB PDB site
Description: Crystal structure of Z004 iGL Fab in complex with ZIKV EDIII
Class: viral protein
Keywords: viral protein
Deposited on 2019-10-29, released 2020-04-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-05-20, with a file datestamp of 2020-05-15.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Z004 iGL Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTA (0-103)
    • Uniprot S6C4S0 (103-End)
    Domains in SCOPe 2.08: d6utaa_
  • Chain 'B':
    Compound: Z004 iGL Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTA (0-107)
    • Uniprot P0DOX7 (108-End)
    Domains in SCOPe 2.08: d6utab1, d6utab2
  • Chain 'C':
    Compound: Env
    Species: Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013 [TaxId:2043570]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6utac_
  • Chain 'E':
    Compound: Env
    Species: Zika virus ZIKV/H. sapiens/FrenchPolynesia/10087PF/2013 [TaxId:2043570]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6utae_
  • Chain 'H':
    Compound: Z004 iGL Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTA (0-103)
    • Uniprot S6C4S0 (103-End)
    Domains in SCOPe 2.08: d6utah_
  • Chain 'L':
    Compound: Z004 iGL Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UTA (0-107)
    • Uniprot P0DOX7 (108-End)
    Domains in SCOPe 2.08: d6utal1, d6utal2

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6utaA (A:)
evqllesggglvqpggslrlscaasgftfssyamswvrqapgkglewvsaisgsggstyy
adsvkgrftisrdnskntlylqmnslraedtavyycakdrgprgvgelfdywgqgtlvtv
ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkthhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6utaA (A:)
evqllesggglvqpggslrlscaasgftfssyamswvrqapgkglewvsaisgsggstyy
adsvkgrftisrdnskntlylqmnslraedtavyycakdrgprgvgelfdywgqgtlvtv
ssastkgpsvfplapssktaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6utaB (B:)
diqmtqspstlsasvgdrvtitcrasqsisswlawyqqkpgkapklliykasslesgvps
rfsgsgsgteftltisslqpddfatyycqqynsypwtfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6utaB (B:)
diqmtqspstlsasvgdrvtitcrasqsisswlawyqqkpgkapklliykasslesgvps
rfsgsgsgteftltisslqpddfatyycqqynsypwtfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6utaC (C:)
mrlkgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgr
litanpvitestenskmmleldppfgdsyivigvgekkithhwhrsgsti

    Sequence, based on observed residues (ATOM records): (download) 
    >6utaC (C:)
syslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavmqtltpvgrlitanpv
itestenskmmleldppfgdsyivigvgekkithhwhrs

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >6utaE (E:)
mrlkgvsyslctaaftftkipaetlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgr
litanpvitestenskmmleldppfgdsyivigvgekkithhwhrsgsti

    Sequence, based on observed residues (ATOM records): (download) 
    >6utaE (E:)
syslctaaftftkiptlhgtvtvevqyagtdgpckvpaqmavdmqtltpvgrlitanpvi
testenskmmleldppfgdsyivigvgekkithhwhrsg

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6utaH (H:)
evqllesggglvqpggslrlscaasgftfssyamswvrqapgkglewvsaisgsggstyy
adsvkgrftisrdnskntlylqmnslraedtavyycakdrgprgvgelfdywgqgtlvtv
ssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlq
ssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepkscdkthhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6utaH (H:)
evqllesggglvqpggslrlscaasgftfssyamswvrqapgkglewvsaisgsggstyy
adsvkgrftisrdnskntlylqmnslraedtavyycakdrgprgvgelfdywgqgtlvtv
ssastkgpsvfplapssksggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6utaL (L:)
diqmtqspstlsasvgdrvtitcrasqsisswlawyqqkpgkapklliykasslesgvps
rfsgsgsgteftltisslqpddfatyycqqynsypwtfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6utaL (L:)
diqmtqspstlsasvgdrvtitcrasqsisswlawyqqkpgkapklliykasslesgvps
rfsgsgsgteftltisslqpddfatyycqqynsypwtfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrg