PDB entry 6usv

View 6usv on RCSB PDB site
Description: Crystal structure of GluN1/GluN2A ligand-binding domain in complex with glycine and SDZ 220-040
Class: metal transport
Keywords: NMDARs, LBD, Ion channels, METAL TRANSPORT
Deposited on 2019-10-28, released 2020-07-15
The last revision prior to the SCOPe 2.07 freeze date was dated 2020-07-15, with a file datestamp of 2020-07-10.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate receptor ionotropic, NMDA 1
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Grin1, Nmdar1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35439 (Start-151)
      • linker (152-153)
    • Uniprot P35439 (154-End)
    Domains in SCOPe 2.07: d6usva_
  • Chain 'B':
    Compound: Glutamate receptor ionotropic, NMDA 2A
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Grin2a
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q00959 (1-138)
      • linker (139-140)
    • Uniprot Q00959 (141-End)
      • conflict (238)
    Domains in SCOPe 2.07: d6usvb_
  • Heterogens: GLY, QGP, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6usvA (A:)
gmstrlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpndtspgsprhtvp
qccygfcidlliklartmnftyevhlvadgkfgtqervnnsnkkewngmmgellsgqadm
ivapltinneraqyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqss
vdiyfrrqvelstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvt
tgelffrsgfgigmrkdspwkqnvslsilkshengfmedldktwvryqecds

    Sequence, based on observed residues (ATOM records): (download) 
    >6usvA (A:)
strlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgphtvpqccygfcidll
iklartmnftyevhlvadgkfgtqervnsnkkewngmmgellsgqadmivapltinnera
qyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqssvdiyfrrqvels
tmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttelffrsgfgig
mrkdspwkqnvslsilkshengfmedldktwvry

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6usvB (B:)
sddnhlsivtleeapfvivedidpltetcvrntvpcrkfvkinnstnegmnvkkcckgfc
idilkklsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineerse
vvdfsvpfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnyp
ymhqymtrfnqrgvedalvslktgkldafiydaavlnykagrdegcklvtigsgyifatt
gygialqkgspwkrqidlallqfvgdgemeeletlwltgichn

    Sequence, based on observed residues (ATOM records): (download) 
    >6usvB (B:)
ddnhlsivtleeapfvivedipltetcvrntvpcrkfvkinnstnegmnvkkcckgfcid
ilkklsrtvkftydlylvtngkhgkkvnnvwngmigevvyqravmavgsltineersevv
dfsvpfvetgisvmvsrgtqvtglsdkkfqrphdysppfrfgtvpngsternirnnypym
hqymtrfnqrgvedalvslktgkldafiydaavlnykagrdegcklvtigsgyifattgy
gialqkgspwkrqidlallqfvgdgemeeletlwltgic