PDB entry 6urt

View 6urt on RCSB PDB site
Description: extended sensor paddles with bound lipids revealed in mechanosensitive channel ynai
Deposited on 2019-10-24, released 2020-10-28
The last revision was dated 2020-10-28, with a file datestamp of 2020-10-23.
Experiment type: EM
Resolution: 3.27 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: Low conductance mechanosensitive channel YnaI
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: ynaI, b1330, JW1323
    Database cross-references and differences (RAF-indexed):
  • Heterogens: QGD

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6urtA (A:)
miaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsi
inyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsr
iikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfs
igdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrrittt
iglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwa
ewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgr

    Sequence, based on observed residues (ATOM records):
    >6urtA (A:)
elftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsiiny
vienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsriik
itiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigd
wirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttigl
ryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewl
aaqqdvylkiidivqshgadfafpsqtlymd

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6urtB (B:)
miaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsi
inyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsr
iikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfs
igdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrrittt
iglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwa
ewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgr

    Sequence, based on observed residues (ATOM records):
    >6urtB (B:)
elftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsiiny
vienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsriik
itiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigd
wirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttigl
ryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewl
aaqqdvylkiidivqshgadfafpsqtlymd

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6urtC (C:)
miaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsi
inyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsr
iikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfs
igdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrrittt
iglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwa
ewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgr

    Sequence, based on observed residues (ATOM records):
    >6urtC (C:)
elftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsiiny
vienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsriik
itiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigd
wirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttigl
ryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewl
aaqqdvylkiidivqshgadfafpsqtlymd

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6urtD (D:)
miaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsi
inyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsr
iikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfs
igdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrrittt
iglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwa
ewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgr

    Sequence, based on observed residues (ATOM records):
    >6urtD (D:)
elftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsiiny
vienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsriik
itiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigd
wirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttigl
ryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewl
aaqqdvylkiidivqshgadfafpsqtlymd

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6urtE (E:)
miaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsi
inyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsr
iikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfs
igdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrrittt
iglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwa
ewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgr

    Sequence, based on observed residues (ATOM records):
    >6urtE (E:)
elftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsiiny
vienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsriik
itiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigd
wirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttigl
ryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewl
aaqqdvylkiidivqshgadfafpsqtlymd

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6urtF (F:)
miaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsi
inyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsr
iikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfs
igdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrrittt
iglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwa
ewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgr

    Sequence, based on observed residues (ATOM records):
    >6urtF (F:)
elftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsiiny
vienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsriik
itiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigd
wirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttigl
ryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewl
aaqqdvylkiidivqshgadfafpsqtlymd

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6urtG (G:)
miaelftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsi
inyvienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsr
iikitiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfs
igdwirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrrittt
iglryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwa
ewlaaqqdvylkiidivqshgadfafpsqtlymdnitppeqgr

    Sequence, based on observed residues (ATOM records):
    >6urtG (G:)
elftnnalnlviifgscaalilmsfwfrrgnrkrkgflfhavqfliytiiisavgsiiny
vienyklkfitpgvidfictsliaviltiklfllinqfekqqikkgrditsarimsriik
itiivvlvllygehfgmslsglltfggigglavgmagkdilsnffsgimlyfdrpfsigd
wirspdrniegtvaeigwritkittfdnrplyvpnslfssisvenpgrmtnrritttigl
ryedaakvgviveavremlknhpaidqrqtllvyfnqfadsslnimvycftkttvwaewl
aaqqdvylkiidivqshgadfafpsqtlymd