PDB entry 6ulf

View 6ulf on RCSB PDB site
Description: crystal structure of 4498 fab in complex with circumsporozoite protein ndn3 and anti-kappa vhh domain
Deposited on 2019-10-07, released 2020-06-17
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-24.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 4498 Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ULF (0-229)
  • Chain 'B':
    Compound: 4498 Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ULF (0-212)
  • Chain 'K':
    Compound: anti Kappa VHH domain
    Species: Camelidae mixed library, synthetic [TaxId:1579311]
    Database cross-references and differences (RAF-indexed):
    • PDB 6ULF (0-120)
  • Chain 'P':
    Compound: Circumsporozoite protein
    Species: PLASMODIUM FALCIPARUM, synthetic [TaxId:5833]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6ulfA (A:)
qvqlvesgggvvqpgrslrlscaasgftfsiygmhwvrqapgkglewvaliwydgtnkyy
tdsvkgrftisrdnskntlflqmnsvraedtavyycardahysdssgysswgyfdywgqg
slvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtf
pavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6ulfB (B:)
eivltqspatlslspgeratlscrasqsvssylawyqqkpgqaprllifdasiratgipa
rfsgsgsgtdftltisslepedfavyycqqrsnwytfgqgtkleikrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrgec

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >6ulfK (K:)
xvqlxxsgggxvqxgxslxlscxaxxxxxxxxxxxwxrqxpgxxrexvxxxxxxxxxxxx
xdsxxgrftxsxdxxxxxxxlqxxxlxxxdxaxyycxxxxxxxxxxxxxxwgxgtxvtvs
s

  • Chain 'P':
    Sequence, based on SEQRES records:
    >6ulfP (P:)
nanpnvdpnanp

    Sequence, based on observed residues (ATOM records):
    >6ulfP (P:)
anpnvdpnanp