PDB entry 6uld

View 6uld on RCSB PDB site
Description: Crystal structure of serine hydroxymethyltransferase from Mycobacterium tuberculosis with bound PLP forming a Schiff base with substrate Serine in one monomer and PLP forming a Schiff base with product Glycine in the other monomer
Class: transferase
Keywords: SSGCID, Serine hydroxymethyltransferase, Mycobacterium tuberculosis, Pyridoxal phosphate, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, TRANSFERASE
Deposited on 2019-10-07, released 2019-10-16
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-10-16, with a file datestamp of 2019-10-11.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: serine hydroxymethyltransferase
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: glyA1, glyA, ERS124361_03156
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0T9NP28 (21-446)
      • expression tag (19-20)
    Domains in SCOPe 2.07: d6ulda1, d6ulda2
  • Chain 'B':
    Compound: serine hydroxymethyltransferase
    Species: Mycobacterium tuberculosis [TaxId:1773]
    Gene: glyA1, glyA, ERS124361_03156
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A0T9NP28 (21-446)
      • expression tag (19-20)
    Domains in SCOPe 2.07: d6uldb1, d6uldb2
  • Heterogens: PLP, SER, GLY, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >6uldA (A:)
    mahhhhhhmgtleaqtqgpgsmsaplaevdpdiaellakelgrqrdtlemiasenfvpra
    vlqaqgsvltnkyaeglpgrryyggcehvdvvenlardrakalfgaefanvqphsgaqan
    aavlhalmspgerllgldlangghlthgmrlnfsgklyengfygvdpathlidmdavrat
    alefrpkviiagwsayprvldfaafrsiadevgakllvdmahfaglvaaglhpspvphad
    vvsttvhktlgggrsglivgkqqyakainsavfpgqqggplmhviagkavalkiaatpef
    adrqrrtlsgariiadrlmapdvakagvsvvsggtdvhlvlvdlrdspldgqaaedllhe
    vgitvnrnavpndprppmvtsglrigtpalatrgfgdteftevadiiatalatgssvdvs
    alkdratrlarafplydgleewslvgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uldA (A:)
    gsmsaplaevdpdiaellakelgrqrdtlemiasenfvpravlqaqgsvltnkyaeglpg
    rryyggcehvdvvenlardrakalfgaefanvqphsgaqanaavlhalmspgerllgldl
    angghlthgmrlnfsgklyengfygvdpathlidmdavratalefrpkviiagwsayprv
    ldfaafrsiadevgakllvdmahfaglvaaglhpspvphadvvsttvhktlgggrsgliv
    gkqqyakainsavfpgqqggplmhviagkavalkiaatpefadrqrrtlsgariiadrlm
    apdvakagvsvvsggtdvhlvlvdlrdspldgqaaedllhevgitvnrnavpndprppmv
    tsglrigtpalatrgfgdteftevadiiatalatgssvdvsalkdratrlarafplydgl
    eewslvgr
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >6uldB (B:)
    mahhhhhhmgtleaqtqgpgsmsaplaevdpdiaellakelgrqrdtlemiasenfvpra
    vlqaqgsvltnkyaeglpgrryyggcehvdvvenlardrakalfgaefanvqphsgaqan
    aavlhalmspgerllgldlangghlthgmrlnfsgklyengfygvdpathlidmdavrat
    alefrpkviiagwsayprvldfaafrsiadevgakllvdmahfaglvaaglhpspvphad
    vvsttvhktlgggrsglivgkqqyakainsavfpgqqggplmhviagkavalkiaatpef
    adrqrrtlsgariiadrlmapdvakagvsvvsggtdvhlvlvdlrdspldgqaaedllhe
    vgitvnrnavpndprppmvtsglrigtpalatrgfgdteftevadiiatalatgssvdvs
    alkdratrlarafplydgleewslvgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >6uldB (B:)
    gsmsaplaevdpdiaellakelgrqrdtlemiasenfvpravlqaqgsvltnkyaeglpg
    rryyggcehvdvvenlardrakalfgaefanvqphsgaqanaavlhalmspgerllgldl
    angghlthgmrlnfsgklyengfygvdpathlidmdavratalefrpkviiagwsayprv
    ldfaafrsiadevgakllvdmahfaglvaaglhpspvphadvvsttvhktlgggrsgliv
    gkqqyakainsavfpgqqggplmhviagkavalkiaatpefadrqrrtlsgariiadrlm
    apdvakagvsvvsggtdvhlvlvdlrdspldgqaaedllhevgitvnrnavpndprppmv
    tsglrigtpalatrgfgdteftevadiiatalatgssvdvsalkdratrlarafplydgl
    eewslvgr