PDB entry 6ug8

View 6ug8 on RCSB PDB site
Description: Complex of ch28/11 Fab and SSEA-4 (monoclinic form)
Class: immune system
Keywords: immunoglobulin, chimeric antibody, antigen binding fragment, ssea-4, complex, immune system
Deposited on 2019-09-26, released 2019-12-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: ch28/11 Fab heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UG8 (0-217)
    Domains in SCOPe 2.08: d6ug8h_
  • Chain 'L':
    Compound: ch28/11 Fab light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6UG8 (0-End)
    Domains in SCOPe 2.08: d6ug8l1, d6ug8l2
  • Heterogens: BGC, GAL, GLA, NGA, SIA, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6ug8H (H:)
qvqlkesgpglvapsqslsitctvsgfslnsygvswvrqppgkglewlgviwgdgstnyh
salmsrlriskdnskrqvflklnslqtddtatyyctkpgsgyafaywgqgtlvtvssast
kgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgly
slssvvtvpssslgtqtyicnvnhkpsntkvdkkvepa

    Sequence, based on observed residues (ATOM records): (download) 
    >6ug8H (H:)
qvqlkesgpglvapsqslsitctvsgfslnsygvswvrqppgkglewlgviwgdgstnyh
salmsrlriskdnskrqvflklnslqtddtatyyctkpgsgyafaywgqgtlvtvssast
kgpsvfplapssgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssv
vtvpssslgtqtyicnvnhkpsntkvdkkvepa

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6ug8L (L:)
envltqspaimsaspgekvtmtcsasssvnymhwyqqksstspklwiydtsklasgvpgr
fsgsgsgnsysltirtmeaedvatyfcfqasgypltfgggtklelkrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6ug8L (L:)
envltqspaimsaspgekvtmtcsasssvnymhwyqqksstspklwiydtsklasgvpgr
fsgsgsgnsysltirtmeaedvatyfcfqasgypltfgggtklelkrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrge